| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786936
Identifier: 91786936
GI number: 91786936
Start: 1063861
End: 1064700
Strand: Reverse
Name: 91786936
Synonym: Bpro_1037
Alternate gene names: NA
Gene position: 1064700-1063861 (Counterclockwise)
Preceding gene: 91786937
Following gene: 91786935
Centisome position: 20.47
GC content: 66.9
Gene sequence:
>840_bases ATGAACGCACCTGCCACCGAACTGCAACGTCGCCTCCAGCAGCGCGTCACCGAGCAGCACGTGGCTGACTTCCAGCGCGA CGGCGCGGTCTGCATCCGCCAGTTGCTCACGCCCGACGAGATCGACCTGTTGCGCGAAGGCATCGAGGCCAACCTGGCCG CGCCCAGCCCGCGCGCCAAGGTGGCCAGCCGCCCGGACGACCCGGGGCGCTTCTTCGAGGACTTCTGCAACTGGCAGGAT ATTGGGCACTACCAGCGTTTCATCTTTGAGACACCCCTGGCGCTGCTCGCACAGCGGTTAATGCGCTCGGCCACGGTGCG CCTGTATCACGACCACCTGCTGGTCAAGGAGCCCGGCACGCGACAGCGTACGCCCTGGCACCAGGACCAGCCTTACTACA ACGTCGAAGGACGGCAGAACATCAGCATGTGGATTCCGGTTGACCCGGTATCGCGCGCCGCCACGCTGGAGTTCGTGGCC GGCTCGCACCAGGGCCCGTGGCTGATGCCGCGCACCTTCATGGACAACCAGGCCAAATGGTTCCCGGAAGGCAGCCTGAC CGACTTGCCCGACGTGGAGGCCGCCCGCGAGCGTTTTCCCATCCTCGGCTGGGACATCGAACCGGGTGATTTCGTGTGCT TCCACATGCTGACCCTGCATGCCGCGGGCGGCGTGGAAGGGGCCCACAGGCGGCGCGTCTTTTCGGTGCGCTTCCTCGGG GACGACGCCCGCCACGCACCGCGAAGCTGGAAAACCTCGCCGGACTTTCCCGGGCTGGTCGACCAGCTCGCGGCGGGCGT GCCCATGAGCCACCCGCTGTTCCCGCAGTTGATCGGCTGA
Upstream 100 bases:
>100_bases AACCCCAGCCAGGAGCGCACGCGTTCCTTCCTGCAGGCCGTGCTGACGCGCACCTGAATCCCCTGAACTCCCTGGATCAC CCACCTCTCGAGAGACTGTC
Downstream 100 bases:
>100_bases CGAGAGGAGGCATCCATGACGCTGCAGCGCTTCGCCATCGACGACCTGAAGCCCACGCCGTGGAAGAACGGCGGCGGCAC CACGCGCGAAATCGTCTGCC
Product: phytanoyl-CoA dioxygenase
Products: NA
Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Protein; Phytanoyl-CoA Dioxygenase Superfamily
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNAPATELQRRLQQRVTEQHVADFQRDGAVCIRQLLTPDEIDLLREGIEANLAAPSPRAKVASRPDDPGRFFEDFCNWQD IGHYQRFIFETPLALLAQRLMRSATVRLYHDHLLVKEPGTRQRTPWHQDQPYYNVEGRQNISMWIPVDPVSRAATLEFVA GSHQGPWLMPRTFMDNQAKWFPEGSLTDLPDVEAARERFPILGWDIEPGDFVCFHMLTLHAAGGVEGAHRRRVFSVRFLG DDARHAPRSWKTSPDFPGLVDQLAAGVPMSHPLFPQLIG
Sequences:
>Translated_279_residues MNAPATELQRRLQQRVTEQHVADFQRDGAVCIRQLLTPDEIDLLREGIEANLAAPSPRAKVASRPDDPGRFFEDFCNWQD IGHYQRFIFETPLALLAQRLMRSATVRLYHDHLLVKEPGTRQRTPWHQDQPYYNVEGRQNISMWIPVDPVSRAATLEFVA GSHQGPWLMPRTFMDNQAKWFPEGSLTDLPDVEAARERFPILGWDIEPGDFVCFHMLTLHAAGGVEGAHRRRVFSVRFLG DDARHAPRSWKTSPDFPGLVDQLAAGVPMSHPLFPQLIG >Mature_279_residues MNAPATELQRRLQQRVTEQHVADFQRDGAVCIRQLLTPDEIDLLREGIEANLAAPSPRAKVASRPDDPGRFFEDFCNWQD IGHYQRFIFETPLALLAQRLMRSATVRLYHDHLLVKEPGTRQRTPWHQDQPYYNVEGRQNISMWIPVDPVSRAATLEFVA GSHQGPWLMPRTFMDNQAKWFPEGSLTDLPDVEAARERFPILGWDIEPGDFVCFHMLTLHAAGGVEGAHRRRVFSVRFLG DDARHAPRSWKTSPDFPGLVDQLAAGVPMSHPLFPQLIG
Specific function: Unknown
COG id: COG5285
COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31805; Mature: 31805
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPATELQRRLQQRVTEQHVADFQRDGAVCIRQLLTPDEIDLLREGIEANLAAPSPRAK CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCH VASRPDDPGRFFEDFCNWQDIGHYQRFIFETPLALLAQRLMRSATVRLYHDHLLVKEPGT HCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCEEEEECCCC RQRTPWHQDQPYYNVEGRQNISMWIPVDPVSRAATLEFVAGSHQGPWLMPRTFMDNQAKW CCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCC FPEGSLTDLPDVEAARERFPILGWDIEPGDFVCFHMLTLHAAGGVEGAHRRRVFSVRFLG CCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEEEEEC DDARHAPRSWKTSPDFPGLVDQLAAGVPMSHPLFPQLIG CCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCC >Mature Secondary Structure MNAPATELQRRLQQRVTEQHVADFQRDGAVCIRQLLTPDEIDLLREGIEANLAAPSPRAK CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCH VASRPDDPGRFFEDFCNWQDIGHYQRFIFETPLALLAQRLMRSATVRLYHDHLLVKEPGT HCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCEEEEECCCC RQRTPWHQDQPYYNVEGRQNISMWIPVDPVSRAATLEFVAGSHQGPWLMPRTFMDNQAKW CCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCC FPEGSLTDLPDVEAARERFPILGWDIEPGDFVCFHMLTLHAAGGVEGAHRRRVFSVRFLG CCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEEEEEC DDARHAPRSWKTSPDFPGLVDQLAAGVPMSHPLFPQLIG CCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA