| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786927
Identifier: 91786927
GI number: 91786927
Start: 1055316
End: 1055792
Strand: Reverse
Name: 91786927
Synonym: Bpro_1028
Alternate gene names: NA
Gene position: 1055792-1055316 (Counterclockwise)
Preceding gene: 91786928
Following gene: 91786925
Centisome position: 20.3
GC content: 65.41
Gene sequence:
>477_bases TTGGCGCCTGAGACAGGCACGCGGCCCAACGGGGTGACGCCACATGTCGACCCCACCTGCCGCTACTGCACGGCGACGGT GGCGGAACTTGAGGACGTGATGTTCCATGTCGCCGACCTGGACCGCTCGCGGGTTTTCCTGTTCAGGGACCAGACGCACC AGGGCCGCTGCGTCGTGCTGCTGAAAAAGCACGTGCGGGAGCTGTTCGAGCTGGAGGACGAAGACCTGCGCGTTTTCATG CGCGAGGTCGCCCGGGTGGCGGCCGCGGTGGCGCAAGTCAGCGCCTGCGACAAGGTGAACTACGCGCTGTACGGCGACAG GGCCAACCACCTCCATGTGCACGTCGTGCCGAAGACACGGAGCGGCCCGGCCTGGGGCCAGCCCTTTATCCTCAACGCGG ACGTTCCGGTGGCGCTTGCACCGCCAGAGCGGCAGGCCATGCTAATAAAACTGAAGCACCTGCTGCAGGCTGAATAA
Upstream 100 bases:
>100_bases CGTGCCGGCACACCCAAGGCGAGCGAACGCGCCATGGTGAGCTATGCCGAATTCAGCGCGCTGGTGGACCTGGATTTCCA CAAAGACCTGGATGACCGGT
Downstream 100 bases:
>100_bases ACGCTACAGCCACTTTTTCCTTAAATTTTAGGAACTACTCAGCTCAATGCGTGCGATACGCTTTTCTTGCTCCCTCGCCC TTTGGGAGAGGGTTGGGGAG
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: HIT Domain-Containing Protein; Histidine Triad Domain Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAPETGTRPNGVTPHVDPTCRYCTATVAELEDVMFHVADLDRSRVFLFRDQTHQGRCVVLLKKHVRELFELEDEDLRVFM REVARVAAAVAQVSACDKVNYALYGDRANHLHVHVVPKTRSGPAWGQPFILNADVPVALAPPERQAMLIKLKHLLQAE
Sequences:
>Translated_158_residues MAPETGTRPNGVTPHVDPTCRYCTATVAELEDVMFHVADLDRSRVFLFRDQTHQGRCVVLLKKHVRELFELEDEDLRVFM REVARVAAAVAQVSACDKVNYALYGDRANHLHVHVVPKTRSGPAWGQPFILNADVPVALAPPERQAMLIKLKHLLQAE >Mature_157_residues APETGTRPNGVTPHVDPTCRYCTATVAELEDVMFHVADLDRSRVFLFRDQTHQGRCVVLLKKHVRELFELEDEDLRVFMR EVARVAAAVAQVSACDKVNYALYGDRANHLHVHVVPKTRSGPAWGQPFILNADVPVALAPPERQAMLIKLKHLLQAE
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17761; Mature: 17629
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPETGTRPNGVTPHVDPTCRYCTATVAELEDVMFHVADLDRSRVFLFRDQTHQGRCVVL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEH LKKHVRELFELEDEDLRVFMREVARVAAAVAQVSACDKVNYALYGDRANHLHVHVVPKTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCC SGPAWGQPFILNADVPVALAPPERQAMLIKLKHLLQAE CCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure APETGTRPNGVTPHVDPTCRYCTATVAELEDVMFHVADLDRSRVFLFRDQTHQGRCVVL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEH LKKHVRELFELEDEDLRVFMREVARVAAAVAQVSACDKVNYALYGDRANHLHVHVVPKTR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCC SGPAWGQPFILNADVPVALAPPERQAMLIKLKHLLQAE CCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA