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The map label for this gene is potD [C]

Identifier: 91786910

GI number: 91786910

Start: 1025174

End: 1026469

Strand: Reverse

Name: potD [C]

Synonym: Bpro_1010

Alternate gene names: 91786910

Gene position: 1026469-1025174 (Counterclockwise)

Preceding gene: 91786911

Following gene: 91786909

Centisome position: 19.74

GC content: 61.5

Gene sequence:

>1296_bases
ATGTCCGACGCTCTTCCTGATCAAAAAGGTACCGCCACTGACACCGCCATCAGCGGCCTGCCGCGCCGTTCCCTACTCAA
GGGCACGGCCGGCATTCTGGCCACGGGCATCTTCCCTGCCGTCCATGCCCAGGAAAAAATCGTGTTGCGCTACCTCGGCA
CCGCGGTCAACCAGGACAAGGCCATTGCCGAGAAGTTCAAGGCCGACACCGGCATCACCATCCAGTACGTGGCCGTCACC
ACCGATGACGTGACCAAGCGCGCCGTGACCGCGCCCAACAGCTTTGACCTGATCGACACCGAGTACTTCTCGCTCAAGAA
GATCGTGCCCACCGGCAACCTGAAGGGCATAGACACCAAGCGCATCAAGAACGCCGACAAGATCACCACGCTGTTCACCA
CCGGCACCGTGGCGGGCAAGGCCGTGGGCGACCAGGGCACCGCGCCCAAGAAAGTGATTTACCTGGAAGGCGAAAAAAGC
AAGGTCTTTGCCAAGAGCCCGACGCAGTTCATGTCGCTCATTCCCACGGTTTACAACGCGGACACGCTGGGCATACGACC
CGACCTGATCAAGCGCCCCATCAGTTCCTGGGCCGAGCTGCTGAACCCCGAGTTCAAGGGCAAGGCGGCCATCCTGAACA
TTCCTTCCATCGGCATCATGGACGCCGCCATGGTGGTCGAGGCCAAGGGAATCTACAAATACCCGGACAAGGGCAACATG
ACCAGGAAGGAGATCGACCTGACGATCGCCACCTTGATCGAGGCCAAGAAGGCCGGCCAGTTCCGCGCGCTGTGGAAGGA
CTTCAACGAATCGGTCAACCTGATGGCTTCGGGCGAAGTGGTGATCCAGTCGATGTGGTCGCCCGCCGTCACGGCCGTGC
GCACCAAGGGCATCGCCTGCAACTTCCAGCCGCTCAAGGAAGGCTATCGCGCCTGGGCCGCCGGCTTCGGCCTGCCCGCC
ACGTTGTCGGGCAAGAAGCTCGACGGCGCCTATGAGTTCATCAACTGGTTCCTCGACGGCTGGGCCGGCGCCTACCTGAA
CCGCCAGGGCTACTACAGCGCCGTGCTGGAAACCGCCAAGGCCAGGATGGAAGCCTACGAATGGGCCTACTGGATGGAAG
GCAAGCCCGCCTCGCAAGACATCAAGAGCCCCAATGGCGACGTGTTGGCCAAGACCGGTTCGGTGCGCGACGGCGGCAGC
TACGAAACCCGCATGGGCGGCATCGCCTGCTGGAACGCCGTGATGGACGAGAACAACTACATGGTCCAGAAATGGAATGA
ATTCGTAGCAGCCTGA

Upstream 100 bases:

>100_bases
TGCCTGGCGCACCCGAGTTTCCTGACCTCCGTTTTTGTGTTCCCTGTTTTCAACCGTCCCTTCGCAAGAAGATTTCACCA
AGCCACCAGGAGTTTTCACC

Downstream 100 bases:

>100_bases
CCGGCATTTCACGCTTACTCCCTCTCCCTCTGGGAGAGGGCGGGGGTGAGGGCAGGCAGCGCCCGCCACTTGCCCTCACC
CTAACCCTCTCCCTGGGGGA

Product: twin-arginine translocation pathway signal protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Signal Peptide Prediction; Tat Pathway Signal Sequence Domain Protein; Signal Peptide; Conserved Protein

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSDALPDQKGTATDTAISGLPRRSLLKGTAGILATGIFPAVHAQEKIVLRYLGTAVNQDKAIAEKFKADTGITIQYVAVT
TDDVTKRAVTAPNSFDLIDTEYFSLKKIVPTGNLKGIDTKRIKNADKITTLFTTGTVAGKAVGDQGTAPKKVIYLEGEKS
KVFAKSPTQFMSLIPTVYNADTLGIRPDLIKRPISSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIYKYPDKGNM
TRKEIDLTIATLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRTKGIACNFQPLKEGYRAWAAGFGLPA
TLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLETAKARMEAYEWAYWMEGKPASQDIKSPNGDVLAKTGSVRDGGS
YETRMGGIACWNAVMDENNYMVQKWNEFVAA

Sequences:

>Translated_431_residues
MSDALPDQKGTATDTAISGLPRRSLLKGTAGILATGIFPAVHAQEKIVLRYLGTAVNQDKAIAEKFKADTGITIQYVAVT
TDDVTKRAVTAPNSFDLIDTEYFSLKKIVPTGNLKGIDTKRIKNADKITTLFTTGTVAGKAVGDQGTAPKKVIYLEGEKS
KVFAKSPTQFMSLIPTVYNADTLGIRPDLIKRPISSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIYKYPDKGNM
TRKEIDLTIATLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRTKGIACNFQPLKEGYRAWAAGFGLPA
TLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLETAKARMEAYEWAYWMEGKPASQDIKSPNGDVLAKTGSVRDGGS
YETRMGGIACWNAVMDENNYMVQKWNEFVAA
>Mature_430_residues
SDALPDQKGTATDTAISGLPRRSLLKGTAGILATGIFPAVHAQEKIVLRYLGTAVNQDKAIAEKFKADTGITIQYVAVTT
DDVTKRAVTAPNSFDLIDTEYFSLKKIVPTGNLKGIDTKRIKNADKITTLFTTGTVAGKAVGDQGTAPKKVIYLEGEKSK
VFAKSPTQFMSLIPTVYNADTLGIRPDLIKRPISSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIYKYPDKGNMT
RKEIDLTIATLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRTKGIACNFQPLKEGYRAWAAGFGLPAT
LSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLETAKARMEAYEWAYWMEGKPASQDIKSPNGDVLAKTGSVRDGGSY
ETRMGGIACWNAVMDENNYMVQKWNEFVAA

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46982; Mature: 46851

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDALPDQKGTATDTAISGLPRRSLLKGTAGILATGIFPAVHAQEKIVLRYLGTAVNQDK
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIAEKFKADTGITIQYVAVTTDDVTKRAVTAPNSFDLIDTEYFSLKKIVPTGNLKGIDTK
HHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHH
RIKNADKITTLFTTGTVAGKAVGDQGTAPKKVIYLEGEKSKVFAKSPTQFMSLIPTVYNA
HHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCC
DTLGIRPDLIKRPISSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIYKYPDKGNM
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHEEEECCCEECCCCCCC
TRKEIDLTIATLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRTKGIAC
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCCEEE
NFQPLKEGYRAWAAGFGLPATLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLETAK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ARMEAYEWAYWMEGKPASQDIKSPNGDVLAKTGSVRDGGSYETRMGGIACWNAVMDENNY
HHHHHHHEEEEECCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHCCCCE
MVQKWNEFVAA
EHHHHHHHHCC
>Mature Secondary Structure 
SDALPDQKGTATDTAISGLPRRSLLKGTAGILATGIFPAVHAQEKIVLRYLGTAVNQDK
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIAEKFKADTGITIQYVAVTTDDVTKRAVTAPNSFDLIDTEYFSLKKIVPTGNLKGIDTK
HHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHH
RIKNADKITTLFTTGTVAGKAVGDQGTAPKKVIYLEGEKSKVFAKSPTQFMSLIPTVYNA
HHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCC
DTLGIRPDLIKRPISSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIYKYPDKGNM
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHEEEECCCEECCCCCCC
TRKEIDLTIATLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRTKGIAC
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHCCEEE
NFQPLKEGYRAWAAGFGLPATLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLETAK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ARMEAYEWAYWMEGKPASQDIKSPNGDVLAKTGSVRDGGSYETRMGGIACWNAVMDENNY
HHHHHHHEEEEECCCCCCHHCCCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHCCCCE
MVQKWNEFVAA
EHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA