| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786860
Identifier: 91786860
GI number: 91786860
Start: 980884
End: 981957
Strand: Reverse
Name: 91786860
Synonym: Bpro_0958
Alternate gene names: NA
Gene position: 981957-980884 (Counterclockwise)
Preceding gene: 91786861
Following gene: 91786859
Centisome position: 18.88
GC content: 64.53
Gene sequence:
>1074_bases ATGGAATACTCACCACGCGGCAGTGCAATCGTGCGCGCCTTGATTTGCAACTTACTGGCGCAAAAGGACGCGTCGGGACC TGTCGGCGCACTGCGCATCGCTGAAACACGGTGGGGCAAGACCAGCGAGGTGGCCACCATCGTGCGCGCAGCGGTTGCGG GCGGCAGCACGGCCAGCGGTGCCTGGGGCAGCGAGCTCGAAGCCCAGTCGGCGGTCGCTGAATTCCTTGAAATCGTCAAG CCTTTGACCATCATCGGGCGAATGGAGAACCTGCGACGGGTTCCAGTGAATGCGCCCGTGGTGAAACAGAGCAGCGGAGC GACCGGCTACTGGGTCGCCCAAGGCCGGGCTACTCCGCTGAGCTCCATGGCATTTGATCGAACGAAGCTCGAGGCCCGCA TGCGCGTCGGAGCGCTGGTAGTGGTCAGCAACGACCTACTGGAAGCGGCCGGTGGCGACAACATATTGCGCGGCGACCTG GCCCTGGCAGTGGCGACAGCCACCGACCTGGCCTTCATCGATTACCTGAACGCCGGTGTAGCAGGGAAGATGCCGGCCGG GATCGCCTACGGGGCACCCGCAATCGCCGCCTCGGGCACCGATGCTGCAGCGTTCAAAGCGGACATCGCAAACGCACTCG AAGCCTTCACGGGCTCCTTGGTCAACGCGGTTTGGGTCGCCCATCCCCGGGCCGGCGCGGCAATCGGGCTCATGAATGGT TCGTTGGGAGTGGCCTGCAACGTAGGCGCACGCGGCGGCGAGCTGGCCGGCTTGCCCTTCCTGACTAGCGAAAGCGTCGA GATCACCACGGACGGCACCACGATCACCCTCATCGACGCCAGCTCAGTCCTGATTGCTGAGGGCGCTGTGACCCTGAGCC AAAGCAACGAGGGCGCCGTGGAAATGGACACTACGCCGACGGGCGATGGCACCACGCCGACCGCCGCTACAACCCTCGTT CCCCTCTGGCAAACCGAGTCCACCGGGATCAAGGCAGAGCGACACATCGAGTGGGAGCTTGGCCGGCCAGGTGCAGCCGT GGTCATCACCCATGTTCCCTATGGAGCGAACTGA
Upstream 100 bases:
>100_bases GCAAAAAAGAGGCGCCTGGGGCAACTGAACGTCATCCATCGTCATGGACTCCCGCGGCGCACGGCGGCCCAATAGACGCA TAGATTAACGAAAGGACACC
Downstream 100 bases:
>100_bases TGGAACTGGACGATCCGAAACTGCGAGACTCGAAATCGCCGGTAACCCTGGGCTTGTTGGTCAAAGTGGCCGAGATGCTC ACGGCGAAGCTGAAAGAGCA
Product: putative major phage head protein/prohead proteinase
Products: NA
Alternate protein names: Phage Head Protein/Prohead Proteinase; Phage-Related Protein; Phage Head Maturation Protease; Head Protein/Prohead Protease
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MEYSPRGSAIVRALICNLLAQKDASGPVGALRIAETRWGKTSEVATIVRAAVAGGSTASGAWGSELEAQSAVAEFLEIVK PLTIIGRMENLRRVPVNAPVVKQSSGATGYWVAQGRATPLSSMAFDRTKLEARMRVGALVVVSNDLLEAAGGDNILRGDL ALAVATATDLAFIDYLNAGVAGKMPAGIAYGAPAIAASGTDAAAFKADIANALEAFTGSLVNAVWVAHPRAGAAIGLMNG SLGVACNVGARGGELAGLPFLTSESVEITTDGTTITLIDASSVLIAEGAVTLSQSNEGAVEMDTTPTGDGTTPTAATTLV PLWQTESTGIKAERHIEWELGRPGAAVVITHVPYGAN
Sequences:
>Translated_357_residues MEYSPRGSAIVRALICNLLAQKDASGPVGALRIAETRWGKTSEVATIVRAAVAGGSTASGAWGSELEAQSAVAEFLEIVK PLTIIGRMENLRRVPVNAPVVKQSSGATGYWVAQGRATPLSSMAFDRTKLEARMRVGALVVVSNDLLEAAGGDNILRGDL ALAVATATDLAFIDYLNAGVAGKMPAGIAYGAPAIAASGTDAAAFKADIANALEAFTGSLVNAVWVAHPRAGAAIGLMNG SLGVACNVGARGGELAGLPFLTSESVEITTDGTTITLIDASSVLIAEGAVTLSQSNEGAVEMDTTPTGDGTTPTAATTLV PLWQTESTGIKAERHIEWELGRPGAAVVITHVPYGAN >Mature_357_residues MEYSPRGSAIVRALICNLLAQKDASGPVGALRIAETRWGKTSEVATIVRAAVAGGSTASGAWGSELEAQSAVAEFLEIVK PLTIIGRMENLRRVPVNAPVVKQSSGATGYWVAQGRATPLSSMAFDRTKLEARMRVGALVVVSNDLLEAAGGDNILRGDL ALAVATATDLAFIDYLNAGVAGKMPAGIAYGAPAIAASGTDAAAFKADIANALEAFTGSLVNAVWVAHPRAGAAIGLMNG SLGVACNVGARGGELAGLPFLTSESVEITTDGTTITLIDASSVLIAEGAVTLSQSNEGAVEMDTTPTGDGTTPTAATTLV PLWQTESTGIKAERHIEWELGRPGAAVVITHVPYGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36366; Mature: 36366
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSPRGSAIVRALICNLLAQKDASGPVGALRIAETRWGKTSEVATIVRAAVAGGSTASG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC AWGSELEAQSAVAEFLEIVKPLTIIGRMENLRRVPVNAPVVKQSSGATGYWVAQGRATPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCEEEEECCCCCCH SSMAFDRTKLEARMRVGALVVVSNDLLEAAGGDNILRGDLALAVATATDLAFIDYLNAGV HHHHHHHHHHHHHHHEEEEEEEECCHHHHCCCCCEEECCEEEEEEHHHHHHHHHHHCCCC AGKMPAGIAYGAPAIAASGTDAAAFKADIANALEAFTGSLVNAVWVAHPRAGAAIGLMNG CCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECC SLGVACNVGARGGELAGLPFLTSESVEITTDGTTITLIDASSVLIAEGAVTLSQSNEGAV CCEEEEECCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCEEEECCEEEEECCCCCCE EMDTTPTGDGTTPTAATTLVPLWQTESTGIKAERHIEWELGRPGAAVVITHVPYGAN EECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MEYSPRGSAIVRALICNLLAQKDASGPVGALRIAETRWGKTSEVATIVRAAVAGGSTASG CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC AWGSELEAQSAVAEFLEIVKPLTIIGRMENLRRVPVNAPVVKQSSGATGYWVAQGRATPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCEEEEECCCCCCH SSMAFDRTKLEARMRVGALVVVSNDLLEAAGGDNILRGDLALAVATATDLAFIDYLNAGV HHHHHHHHHHHHHHHEEEEEEEECCHHHHCCCCCEEECCEEEEEEHHHHHHHHHHHCCCC AGKMPAGIAYGAPAIAASGTDAAAFKADIANALEAFTGSLVNAVWVAHPRAGAAIGLMNG CCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECC SLGVACNVGARGGELAGLPFLTSESVEITTDGTTITLIDASSVLIAEGAVTLSQSNEGAV CCEEEEECCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCEEEECCEEEEECCCCCCE EMDTTPTGDGTTPTAATTLVPLWQTESTGIKAERHIEWELGRPGAAVVITHVPYGAN EECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA