| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786832
Identifier: 91786832
GI number: 91786832
Start: 949360
End: 950016
Strand: Reverse
Name: 91786832
Synonym: Bpro_0930
Alternate gene names: NA
Gene position: 950016-949360 (Counterclockwise)
Preceding gene: 91786849
Following gene: 91786831
Centisome position: 18.27
GC content: 63.17
Gene sequence:
>657_bases ATGGTTCACGCCGGCCGCCCCCTGAAGCCAATGAAGTTGCCGGAGACTCGCATGTCCACGATCTCACTCAATTTCGAGAC CGATACGGTAGTTCTGCCACCGCCTGCGCTGTCACCCCAGGCTACGCTGGAGCAGGCGCTGAAGAACCGCCACAGTTCGC GGGCTTTCCTGCCCGATCCGTTACCGCTGGAGACGCTGTCGGCGCTGCTCTGGGCCGGCTTTGGCATCAACCGGCAGGAA AGCGCCCATCGCACCGCGCCCTCGACCCACAACTGGCAGGAAATCGATATTTTTGCGGTGCTGGCTGAGGGAGCCTACCG CTACGAGGCGCAGACCCACCAGCTGTTGCTCATCAAGGCCGAAGACCTGCGCAGCACGACCGGCACCCAGGACTTCATTG CCACCGCACCGCTCAATCTGGTCTACGTCGCGGACTTTCATCGCATGCCGGATGCCCGGCCGGCAGAGCGCCGTTTCCTC GCCGGGGCAGATGCCGGCTGCATCGCGCAAAATATTTATCTGTTTTGCGCCAGCGTGGGCCTGGCGACGGTGGTGCGCGG TCTGATCGACCGCTCCCGGCTGGCGGCATTACTGGGACTGGCAAAGACCCAACGCATTGCATTGGCGCAAACCGTTGGTT ATCCGGCCGCGAGCTGA
Upstream 100 bases:
>100_bases AATTCAGGCAGACTGGAACAAGACCAGAATGTGTCACGGGATGGCGTCGGAAAATGGCTGCCCGCCCGCCATCCAGTGTT TGGCCTGGGTGATCTGCCTC
Downstream 100 bases:
>100_bases ACGCCTCTTTTTCTCTTCTTCCCGGGAGATGGTTCATGGAACTGACCTCTACTGCTTTTACGCCTCAGGGCGAGATCCCG CAACGCCATACCTGCGAGGG
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MVHAGRPLKPMKLPETRMSTISLNFETDTVVLPPPALSPQATLEQALKNRHSSRAFLPDPLPLETLSALLWAGFGINRQE SAHRTAPSTHNWQEIDIFAVLAEGAYRYEAQTHQLLLIKAEDLRSTTGTQDFIATAPLNLVYVADFHRMPDARPAERRFL AGADAGCIAQNIYLFCASVGLATVVRGLIDRSRLAALLGLAKTQRIALAQTVGYPAAS
Sequences:
>Translated_218_residues MVHAGRPLKPMKLPETRMSTISLNFETDTVVLPPPALSPQATLEQALKNRHSSRAFLPDPLPLETLSALLWAGFGINRQE SAHRTAPSTHNWQEIDIFAVLAEGAYRYEAQTHQLLLIKAEDLRSTTGTQDFIATAPLNLVYVADFHRMPDARPAERRFL AGADAGCIAQNIYLFCASVGLATVVRGLIDRSRLAALLGLAKTQRIALAQTVGYPAAS >Mature_218_residues MVHAGRPLKPMKLPETRMSTISLNFETDTVVLPPPALSPQATLEQALKNRHSSRAFLPDPLPLETLSALLWAGFGINRQE SAHRTAPSTHNWQEIDIFAVLAEGAYRYEAQTHQLLLIKAEDLRSTTGTQDFIATAPLNLVYVADFHRMPDARPAERRFL AGADAGCIAQNIYLFCASVGLATVVRGLIDRSRLAALLGLAKTQRIALAQTVGYPAAS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 23797; Mature: 23797
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHAGRPLKPMKLPETRMSTISLNFETDTVVLPPPALSPQATLEQALKNRHSSRAFLPDP CCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC LPLETLSALLWAGFGINRQESAHRTAPSTHNWQEIDIFAVLAEGAYRYEAQTHQLLLIKA CCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEEEE EDLRSTTGTQDFIATAPLNLVYVADFHRMPDARPAERRFLAGADAGCIAQNIYLFCASVG HHHCCCCCCCHHEEECCCEEEEEEEHHCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHH LATVVRGLIDRSRLAALLGLAKTQRIALAQTVGYPAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVHAGRPLKPMKLPETRMSTISLNFETDTVVLPPPALSPQATLEQALKNRHSSRAFLPDP CCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC LPLETLSALLWAGFGINRQESAHRTAPSTHNWQEIDIFAVLAEGAYRYEAQTHQLLLIKA CCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEEEE EDLRSTTGTQDFIATAPLNLVYVADFHRMPDARPAERRFLAGADAGCIAQNIYLFCASVG HHHCCCCCCCHHEEECCCEEEEEEEHHCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHH LATVVRGLIDRSRLAALLGLAKTQRIALAQTVGYPAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]