Click here to switch to the map view.

The map label for this gene is ugpB [H]

Identifier: 91786759

GI number: 91786759

Start: 877677

End: 878990

Strand: Reverse

Name: ugpB [H]

Synonym: Bpro_0857

Alternate gene names: 91786759

Gene position: 878990-877677 (Counterclockwise)

Preceding gene: 91786774

Following gene: 91786758

Centisome position: 16.9

GC content: 60.5

Gene sequence:

>1314_bases
ATGAAATCCCGTCTATCTGCGTTGACTTTCGCCGCCTGCGCCCTGCTTGCTCCCCTGGCGAGCCAGGCGCAAACAGAGAT
CCAGTGGTGGCACTCCATGGTTGCCGTCAACAACGAATGGGTCAACGACCTGGCCAGGGATTTCAACGCGAGCCAGAAGG
AATACCGCATAGTGCCCACTTACAAGGGCAGCTACGACGAGTCGATGACTGCCGCCATCGCCGCCTTCCGCGCCGGTAAC
GCGCCGCACATCCTGCAGGTGTTCGAGGTAGGTACCGCCACCATGATGGCCAGCAAGGGCGCGATCGTGCCCGTAGCCAA
GGTCATGAAGGACGCCGGACAGAAATTCGACCCGGCTGCCTACATATCGGCAGTGGCCGGCTACTACACGGCACCGAACG
GCCAGATGCTGAGCTTCCCGTTCAACAGCTCCACCACCATTTTTTACTACAACAAGGACGCCTTCAAGGCGGCGGGCCTG
GACCCGGACAAGGCGCCCTCCACCTGGCCCGAAGTCGCGCTGGCCGCGGCCAAGCTCAAGGCCTCCGGCCACAAGTGCCC
CTTCACAACGGCCTGGCAGGGCTGGACCCAGCTGGAAAGCTTTTCCGCCTGGCACAACGTCGAGTTCGCCAGCAAGTCCA
ATGGCCTGGCCGGCATGGACGCGCGGATGAAGATCAACTCGCCACTGCACCAGCGGCATATCGAGAACCTGGCCAGCATG
TCCAAGCAGGGCCTGTTCGTCTACAAGGGCCGTGGCAATGTGCCCGAAGCGAGTTTCATCTCGGGCGAGTGCGCAATGAT
CAACACCTCATCGGGCTTCTATGGCAATGTGGCCAAAAACACCAAATTCGGCTATGGCTTGGCCCCGCTGCCCTACTACC
CTGACGTGCCCGGTGCGCCGCAAAACACGGTGATCGGGGGTGCCAGCCTGTGGGTCATGTCAGGCAAGAAACCCGCTGAA
TACAAAGGGGTAGCAGCCTTCTTCGGTTACATCTCCAGCCCTGAAGTGCAGTCCGCCAGCCACAAGCGTACCGGCTATCT
GCCGGTCACCACGGCGGCCTACCAGCTCACAGAAAAATCCGGCTTCTACAAGGAAAAACCGGGCACCGATGTCGCCGTGA
CACAGATGATTCGCAAGGTCACCGACAAGAGCCGCGGTATCCGCCTGGGCAACTACGTACAGGTTCGCGCGATCGAGGAT
GAAGAGCTCGAGCAGGTCTGGAGCGGCAAGAAATCAGCCAAGGAAGCGCTGGATGCCATTGTGAAACGCGGCAACGAGCA
GCTCGAACGCTTCGAGAAAGCCAACAAGCCCTGA

Upstream 100 bases:

>100_bases
GAAGGCACCAAATCGCTTAAATCGGCCTGTCACAAACAGGTCCCAGACTGCCCAACTTGAATAAGCGACCCAAAAATGGG
CCTTCACCTCAGGAGTTTTC

Downstream 100 bases:

>100_bases
AATCTCCGGCGCCGGCCGCGGGGCCACGCCACGGCTAAACCCGCAATCCCCCGCATGCCCGGTTGCTGGCGGGCGGATTG
TTTACCTTGAATGGGCCCAT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKSRLSALTFAACALLAPLASQAQTEIQWWHSMVAVNNEWVNDLARDFNASQKEYRIVPTYKGSYDESMTAAIAAFRAGN
APHILQVFEVGTATMMASKGAIVPVAKVMKDAGQKFDPAAYISAVAGYYTAPNGQMLSFPFNSSTTIFYYNKDAFKAAGL
DPDKAPSTWPEVALAAAKLKASGHKCPFTTAWQGWTQLESFSAWHNVEFASKSNGLAGMDARMKINSPLHQRHIENLASM
SKQGLFVYKGRGNVPEASFISGECAMINTSSGFYGNVAKNTKFGYGLAPLPYYPDVPGAPQNTVIGGASLWVMSGKKPAE
YKGVAAFFGYISSPEVQSASHKRTGYLPVTTAAYQLTEKSGFYKEKPGTDVAVTQMIRKVTDKSRGIRLGNYVQVRAIED
EELEQVWSGKKSAKEALDAIVKRGNEQLERFEKANKP

Sequences:

>Translated_437_residues
MKSRLSALTFAACALLAPLASQAQTEIQWWHSMVAVNNEWVNDLARDFNASQKEYRIVPTYKGSYDESMTAAIAAFRAGN
APHILQVFEVGTATMMASKGAIVPVAKVMKDAGQKFDPAAYISAVAGYYTAPNGQMLSFPFNSSTTIFYYNKDAFKAAGL
DPDKAPSTWPEVALAAAKLKASGHKCPFTTAWQGWTQLESFSAWHNVEFASKSNGLAGMDARMKINSPLHQRHIENLASM
SKQGLFVYKGRGNVPEASFISGECAMINTSSGFYGNVAKNTKFGYGLAPLPYYPDVPGAPQNTVIGGASLWVMSGKKPAE
YKGVAAFFGYISSPEVQSASHKRTGYLPVTTAAYQLTEKSGFYKEKPGTDVAVTQMIRKVTDKSRGIRLGNYVQVRAIED
EELEQVWSGKKSAKEALDAIVKRGNEQLERFEKANKP
>Mature_437_residues
MKSRLSALTFAACALLAPLASQAQTEIQWWHSMVAVNNEWVNDLARDFNASQKEYRIVPTYKGSYDESMTAAIAAFRAGN
APHILQVFEVGTATMMASKGAIVPVAKVMKDAGQKFDPAAYISAVAGYYTAPNGQMLSFPFNSSTTIFYYNKDAFKAAGL
DPDKAPSTWPEVALAAAKLKASGHKCPFTTAWQGWTQLESFSAWHNVEFASKSNGLAGMDARMKINSPLHQRHIENLASM
SKQGLFVYKGRGNVPEASFISGECAMINTSSGFYGNVAKNTKFGYGLAPLPYYPDVPGAPQNTVIGGASLWVMSGKKPAE
YKGVAAFFGYISSPEVQSASHKRTGYLPVTTAAYQLTEKSGFYKEKPGTDVAVTQMIRKVTDKSRGIRLGNYVQVRAIED
EELEQVWSGKKSAKEALDAIVKRGNEQLERFEKANKP

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=418, Percent_Identity=52.8708133971292, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47638; Mature: 47638

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRLSALTFAACALLAPLASQAQTEIQWWHSMVAVNNEWVNDLARDFNASQKEYRIVPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEC
YKGSYDESMTAAIAAFRAGNAPHILQVFEVGTATMMASKGAIVPVAKVMKDAGQKFDPAA
CCCCCCHHHHHHHHHHHCCCCCCEEEEEHHCHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
YISAVAGYYTAPNGQMLSFPFNSSTTIFYYNKDAFKAAGLDPDKAPSTWPEVALAAAKLK
HHHHHHHCEECCCCCEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHH
ASGHKCPFTTAWQGWTQLESFSAWHNVEFASKSNGLAGMDARMKINSPLHQRHIENLASM
CCCCCCCCCHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
SKQGLFVYKGRGNVPEASFISGECAMINTSSGFYGNVAKNTKFGYGLAPLPYYPDVPGAP
HHCCEEEECCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNTVIGGASLWVMSGKKPAEYKGVAAFFGYISSPEVQSASHKRTGYLPVTTAAYQLTEKS
CCCEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC
GFYKEKPGTDVAVTQMIRKVTDKSRGIRLGNYVQVRAIEDEELEQVWSGKKSAKEALDAI
CCCCCCCCCHHHHHHHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHCCCHHHHHHHHHH
VKRGNEQLERFEKANKP
HHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKSRLSALTFAACALLAPLASQAQTEIQWWHSMVAVNNEWVNDLARDFNASQKEYRIVPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEC
YKGSYDESMTAAIAAFRAGNAPHILQVFEVGTATMMASKGAIVPVAKVMKDAGQKFDPAA
CCCCCCHHHHHHHHHHHCCCCCCEEEEEHHCHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
YISAVAGYYTAPNGQMLSFPFNSSTTIFYYNKDAFKAAGLDPDKAPSTWPEVALAAAKLK
HHHHHHHCEECCCCCEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHH
ASGHKCPFTTAWQGWTQLESFSAWHNVEFASKSNGLAGMDARMKINSPLHQRHIENLASM
CCCCCCCCCHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
SKQGLFVYKGRGNVPEASFISGECAMINTSSGFYGNVAKNTKFGYGLAPLPYYPDVPGAP
HHCCEEEECCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNTVIGGASLWVMSGKKPAEYKGVAAFFGYISSPEVQSASHKRTGYLPVTTAAYQLTEKS
CCCEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC
GFYKEKPGTDVAVTQMIRKVTDKSRGIRLGNYVQVRAIEDEELEQVWSGKKSAKEALDAI
CCCCCCCCCHHHHHHHHHHHHHHHCCEEECCEEEEEECCHHHHHHHHCCCHHHHHHHHHH
VKRGNEQLERFEKANKP
HHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA