Click here to switch to the map view.

The map label for this gene is ugpA [H]

Identifier: 91786758

GI number: 91786758

Start: 876697

End: 877578

Strand: Reverse

Name: ugpA [H]

Synonym: Bpro_0856

Alternate gene names: 91786758

Gene position: 877578-876697 (Counterclockwise)

Preceding gene: 91786759

Following gene: 91786757

Centisome position: 16.88

GC content: 58.96

Gene sequence:

>882_bases
ATGGAAAAACGCGTCTTGTTCCGCTCAAGCTGGCTGCCGTGGCTGCTGCTGGCTCCCCAGGTCATCGTGATCAGCGTGTT
TTTCTTCTGGCCCGCAGCGCAGGCGCTGCTGCAATCGTTCCAGGTACAGGATGCCTTTGGGAGCTCCACCGAATGGGTCG
GCCTGGCCAACTTTGAAAACCTGTTCAACGATCCGGGTTACCTGGCCTCCTTCAAAACCACCGCGGTATTTTCCGTGCTG
GTGGCCGTGCTTGGTATCTCCTTGTCGCTGACGCTGGCGATCTTTGCAGACCGCATCATCAAGGGCGCGCTGTTTTACAA
AACCTTGCTGGTCGTCCCCTATGCAGTGGCCCCTGCCGTGGCCGGTGTGCTGTGGGTGTTCATGTTTTCTCCGGCGCTGG
GCGTGGTCGCCTATGCACTGGACCGGGTGGGCATCAACTGGAACCACCTGCTCGATTCCGGCCACGCGATGACGCTGATC
GTGATGGCCGCGGTGTGGAAGCAGATTTCCTACAACTTCCTGTTCTTCCTGGCCGGTCTGCAGTCGATTCCCAAGTCACT
GATCGAGGCCGCAGCGATTGACGGTGCCCGCCCCTGGCGGCGCTTCTGGACGATCCAGTTCCCCCTGCTGTCACCCACCA
CCTTCTTCCTGCTGGTGATCAACATGGTGTATGCCTTCTTCGACACGTTTGCCATCGTCGACGCCACCACCCATGGCGGC
CCCGGCCAGGACACGTCCATCCTGGTTTACAAGGTCTATTACGATGGCTTCAAGGCCATGGACCTCGGCGGCTCAGCGGC
GCAGTCGGTGGTCTTGATGTTCATCGTGATTGCGCTGACGGTGGTGCAGTTCCGGTATGTCGAAAAGAAAGTGCAATATT
GA

Upstream 100 bases:

>100_bases
GAAATCTCCGGCGCCGGCCGCGGGGCCACGCCACGGCTAAACCCGCAATCCCCCGCATGCCCGGTTGCTGGCGGGCGGAT
TGTTTACCTTGAATGGGCCC

Downstream 100 bases:

>100_bases
TGGTGCCCCCACGTTCGCGCACTGCGTGTCGCTCTCTGCCCCCCAAGGGAGTGCTCTTTTCCTTGGGGCGGCCCGGCGGA
AAAGCCTTGCCCCCACGTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEKRVLFRSSWLPWLLLAPQVIVISVFFFWPAAQALLQSFQVQDAFGSSTEWVGLANFENLFNDPGYLASFKTTAVFSVL
VAVLGISLSLTLAIFADRIIKGALFYKTLLVVPYAVAPAVAGVLWVFMFSPALGVVAYALDRVGINWNHLLDSGHAMTLI
VMAAVWKQISYNFLFFLAGLQSIPKSLIEAAAIDGARPWRRFWTIQFPLLSPTTFFLLVINMVYAFFDTFAIVDATTHGG
PGQDTSILVYKVYYDGFKAMDLGGSAAQSVVLMFIVIALTVVQFRYVEKKVQY

Sequences:

>Translated_293_residues
MEKRVLFRSSWLPWLLLAPQVIVISVFFFWPAAQALLQSFQVQDAFGSSTEWVGLANFENLFNDPGYLASFKTTAVFSVL
VAVLGISLSLTLAIFADRIIKGALFYKTLLVVPYAVAPAVAGVLWVFMFSPALGVVAYALDRVGINWNHLLDSGHAMTLI
VMAAVWKQISYNFLFFLAGLQSIPKSLIEAAAIDGARPWRRFWTIQFPLLSPTTFFLLVINMVYAFFDTFAIVDATTHGG
PGQDTSILVYKVYYDGFKAMDLGGSAAQSVVLMFIVIALTVVQFRYVEKKVQY
>Mature_293_residues
MEKRVLFRSSWLPWLLLAPQVIVISVFFFWPAAQALLQSFQVQDAFGSSTEWVGLANFENLFNDPGYLASFKTTAVFSVL
VAVLGISLSLTLAIFADRIIKGALFYKTLLVVPYAVAPAVAGVLWVFMFSPALGVVAYALDRVGINWNHLLDSGHAMTLI
VMAAVWKQISYNFLFFLAGLQSIPKSLIEAAAIDGARPWRRFWTIQFPLLSPTTFFLLVINMVYAFFDTFAIVDATTHGG
PGQDTSILVYKVYYDGFKAMDLGGSAAQSVVLMFIVIALTVVQFRYVEKKVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=59.5890410958904, Blast_Score=337, Evalue=8e-94,
Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=30.5147058823529, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=27.4509803921569, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32576; Mature: 32576

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVLFRSSWLPWLLLAPQVIVISVFFFWPAAQALLQSFQVQDAFGSSTEWVGLANFEN
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH
LFNDPGYLASFKTTAVFSVLVAVLGISLSLTLAIFADRIIKGALFYKTLLVVPYAVAPAV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWVFMFSPALGVVAYALDRVGINWNHLLDSGHAMTLIVMAAVWKQISYNFLFFLAGL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGARPWRRFWTIQFPLLSPTTFFLLVINMVYAFFDTFAIVDATTHGG
HHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC
PGQDTSILVYKVYYDGFKAMDLGGSAAQSVVLMFIVIALTVVQFRYVEKKVQY
CCCCCEEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRVLFRSSWLPWLLLAPQVIVISVFFFWPAAQALLQSFQVQDAFGSSTEWVGLANFEN
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH
LFNDPGYLASFKTTAVFSVLVAVLGISLSLTLAIFADRIIKGALFYKTLLVVPYAVAPAV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLWVFMFSPALGVVAYALDRVGINWNHLLDSGHAMTLIVMAAVWKQISYNFLFFLAGL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGARPWRRFWTIQFPLLSPTTFFLLVINMVYAFFDTFAIVDATTHGG
HHHHHHHHHHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC
PGQDTSILVYKVYYDGFKAMDLGGSAAQSVVLMFIVIALTVVQFRYVEKKVQY
CCCCCEEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA