The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cobT [H]

Identifier: 91786643

GI number: 91786643

Start: 756781

End: 757866

Strand: Reverse

Name: cobT [H]

Synonym: Bpro_0741

Alternate gene names: 91786643

Gene position: 757866-756781 (Counterclockwise)

Preceding gene: 91786644

Following gene: 91786642

Centisome position: 14.57

GC content: 70.35

Gene sequence:

>1086_bases
ATGACCGCCACCACCTCTTCCCCCCCTGTCTCCTCTTCTCACCCGGCCCTGCACATTCCGGCGATCGCGCCCATCGCCGA
CGCCGTGCTGGCGGACCGGTTGCAGCGCAAGATCGACCACAAGACCAAGCCCGTGGGCGCACTGGGCGCGCTGGAGGGCC
TGGCGCTGCAGCTGGGCCTGATCCAGCGCCGCGACACCGTCACGCTGCACGCGCCGCAAATGGTGGTGTTTGCGGCCGAC
CACGGCATTGCCGCAGAAGGCGTGTCCGCCTATCCGCAGGCCGTCACCGTGCAGATGGTGGGCAACATGCTGGCCGGCGG
CGCAGCCATCAATGTGTTTGCGCGCCAGCACGGCTTTGCATTGCACGTGGTCGACGCCGGCGTCGCCGCCGACCTGCCCG
CGCATCCCCAGCTGCTGCAGCGCAAGATCGCGCACGGCACGCGCAACCTCTGCAGCGAGCCCGCCATGTCGCTGGCCGAG
GCCGATGCGGCGCTGCAGGCGGGCATGGCCGTCGTGCGGGCCCTGCCCGGCAATGTGGTGGCGCTGGGCGAAATGGGAAT
TGCCAACACCTCGGCGGCGGCCCTGCTATTTGCGCGGCTGGCCGGCGCCAGCCTGGAGGACGCCACCGGGCGCGGCACGG
GCCTGACCGACCCACAGTTGCAGCACAAGCAGGGCGTGCTGCTGCGCGCCCTGGAACGCCATGCTGATGCCACCCGGCCG
CTTGACGCGCTCGCCGCGCTCGGTGGTTTTGAAATTGCCATGATGAGCGGCGCGATGCTGCAGGCCGCCAGCGAACGCCG
CGTGGTGCTGGTCGACGGTTTCATTGCCGGCGCCGCAGCGCTGGTGGCCCACGCGCTGGCGCCGCAGGTGCGCGACTACC
TGGTGTTTTGCCACCGCTCGGCCGAGCGTGGCCACGGCCTGCTGCTGGCCCACCTGAAGGCCACGCCACTGCTTGAACTC
GATCTGCGGCTGGGAGAAGGCACGGGCGCCCTGCTGGCCTGGCCGCTGGTGCAGTCGGCGGCGCTGTTCCTGGACGAGAT
GGCCAGCTTTGACTCGGCCGGCGTGAGTGGCAAGGAGAACCCCTGA

Upstream 100 bases:

>100_bases
CTGCTTCAACGCCCCCGCAGGGCCAGGAGGCAAGCGCTGACAGCGCCGCCTCGTGCTACTGCCCGGCCTGCCTCCAGCTG
ATCACCGCGAACCGAGCCCG

Downstream 100 bases:

>100_bases
ATCCGCCAGACCCTGCGATAACCGCCCCATGAATCCGATCAGCCAGTTTGTCCGCGAATACCTGCTCGCCGTCCAGTTCT
TCACCCGCATACCCGTCGTG

Product: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase

Products: NA

Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAAD
HGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAE
ADAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP
LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLEL
DLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP

Sequences:

>Translated_361_residues
MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAAD
HGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAE
ADAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP
LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLEL
DLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP
>Mature_360_residues
TATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAADH
GIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEA
DAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRPL
DALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLELD
LRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP

Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobT family [H]

Homologues:

Organism=Escherichia coli, GI1788300, Length=342, Percent_Identity=37.1345029239766, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR023195
- InterPro:   IPR017846 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: =2.4.2.21 [H]

Molecular weight: Translated: 37221; Mature: 37090

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGL
CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IQRRDTVTLHAPQMVVFAADHGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFA
HCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCE
LHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEADAALQAGMAVVRALPGNVV
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRS
HHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AERGHGLLLAHLKATPLLELDLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKEN
CCCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
P
C
>Mature Secondary Structure 
TATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGL
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IQRRDTVTLHAPQMVVFAADHGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFA
HCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCE
LHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEADAALQAGMAVVRALPGNVV
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRS
HHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AERGHGLLLAHLKATPLLELDLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKEN
CCCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA