| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786638
Identifier: 91786638
GI number: 91786638
Start: 750395
End: 752014
Strand: Reverse
Name: 91786638
Synonym: Bpro_0736
Alternate gene names: NA
Gene position: 752014-750395 (Counterclockwise)
Preceding gene: 91786639
Following gene: 91786637
Centisome position: 14.46
GC content: 67.84
Gene sequence:
>1620_bases ATGCCCGAAGAACCACTCAAGGCAACGCCACTGTCCGCCGCTGAATCGCTGTCGCCGTGGACGCCCATCACCTACCCGGT ATTCCGCATGCTGTGGAGCACCTGGCTGGTGGCCAACATCTGCATGTGGATGAACGACGTGGCCGCCGCGTGGATGATGA CGTCCATGACCACCACGCCGCTCTGGGTGGCGCTGGTGCAGTCGGCCTCGACCCTGCCGGTGTTCCTGCTCGGCCTGCCC AGCGGCGCGCTGGCCGACATCCTGGACCGGCGGCGCTACTTCATCATGACGCAGTTCTGGATTGCCGGCGTGGCGACGCT GCTGTGCATCGCCGTGATCTCGGACGTGATGACGCCGCCGCTGCTGCTGGCCCTGACCTTCGCCAACGGCATCGGGCTGG CCATGCGCTGGCCAGTGTTCGCCGCCATCGTGCCCGAACTGGTGCCGCGCCCGCAGTTGCCGGCCGCGCTGGCCTTGAAC GGTGTGTCCATGAATGCCTCGCGCATCATCGGCCCGCTGGTGGCCGGCGCACTGATTGCCGGTGCCGGCACCGCCTGGGT ATTTGTGCTCAATGCCGTGCTGTCGGTCATCTCGGGCTTCATCATCATGCGCTGGCGGCGCGACCATGTACCCAGCCCGC TGGGGCGTGAGCGCCTGGTCAGCGCCATGCGCGTGGGACTGCAGTTTGTCCGTCAGTCGCACCGCCTGCGGGCCGTGCTG GTACGCGTCTCGCTGTTTTTCCTGCATTCCACCGCCCTGCTGGCGCTGCTGCCGCTGGTGGCGCGCAACCTGCACGGCGG CGGTGCCGGCACCTTCACGCTGCTGCTGGCCTCGATGGGGGCGGGGGCCATCATCGCCGCCATGTACCTGCCGCGCCTGC GCCAGATGATGCCGCGCGACACGCTGGTGCTGCGCGCCACCGTGCTGCAGTCGGCCTCCACCGCCGTCATGGCGCTGGCG CCGAATATCTATATCGCCGTGCCGGCCATGCTGCTCAATGGCATGGCCTGGATCTCCTGCGCCAATTCGCTCAGCGTCTC GGCCCAACTGTCGCTGCCTGACTGGGTGCGCGCACGCGGCATGTCGATGTACCAGATGGCGATCATGGGCGCCAGCGCCC TCGGCGCCGCGCTGTGGGGCCAGGTAGCCACGCTCACCAGCGTGCCGACGGGCCTGCTGGTGGCCGCGCTGAGCGGCACC GTCACCATGCTGCTGGCCCAGCGCTGGGTCACGGACCTCAGCATCGAGGAAGACCTGACACCATCACGTCAATTCAAGGT GCCGGTGGCCGACGTGCCGCCCGGTGCGGGCCATGTGGTGGTCACCATTGAATACCTGATAGACCCGGCCCGTGCCGACG ACTTTCGCGCGCTGATGCAGGAAAGCCGCCGCAGCCGCCTGCGCCAGGGAGCACTCGACTGGGCGCTGCTGCGCGACATC GGCAACCCGGGCCGCTACATCGAACAGATCATTGACGAGTCATGGACCGAACACCTGCGGCGCTTTGACCGCGTGACCGC CAGCGACGTGGCCTTGCGCGAACGCAAACTCGCCTTTCATATCGGCGACGAGCCGCCACTGGTGACCCGCAGCGTGGTCG AGTCGCCAGGGCGGGGCTAA
Upstream 100 bases:
>100_bases CGGCTGCATGAAAGCCGGCCGCAGCAGACCCTCTGAAAAATCCCGGAAGAACCTGGAAGTAAATCGGACACAACTCGGCA GAAAACGGAAAAATCACTGA
Downstream 100 bases:
>100_bases ACTCCGGGACCCAAGTCCCCACCAACCCACGGAGCCATCGTGATTGCAGCCACTCCCCCAGCCCCTTACTACGCCGTCAT CTTCACCTCACTGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; Transmembrane Efflux Protein; Multidrug ABC Transporter; MFS Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily; Transport Transmembrane Protein; Drug Resistance Efflux Protein; Permease; Mfs Transporter; Membrane Transporter; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; Macrolide-Efflux Protein; Integral Membrane Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Dioxygenase; MFS Family Diterpenoid Transporter; Facilitator Family Protein; Permeases Of Facilitator Superfamily; MFS Superfamily Transporter
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MPEEPLKATPLSAAESLSPWTPITYPVFRMLWSTWLVANICMWMNDVAAAWMMTSMTTTPLWVALVQSASTLPVFLLGLP SGALADILDRRRYFIMTQFWIAGVATLLCIAVISDVMTPPLLLALTFANGIGLAMRWPVFAAIVPELVPRPQLPAALALN GVSMNASRIIGPLVAGALIAGAGTAWVFVLNAVLSVISGFIIMRWRRDHVPSPLGRERLVSAMRVGLQFVRQSHRLRAVL VRVSLFFLHSTALLALLPLVARNLHGGGAGTFTLLLASMGAGAIIAAMYLPRLRQMMPRDTLVLRATVLQSASTAVMALA PNIYIAVPAMLLNGMAWISCANSLSVSAQLSLPDWVRARGMSMYQMAIMGASALGAALWGQVATLTSVPTGLLVAALSGT VTMLLAQRWVTDLSIEEDLTPSRQFKVPVADVPPGAGHVVVTIEYLIDPARADDFRALMQESRRSRLRQGALDWALLRDI GNPGRYIEQIIDESWTEHLRRFDRVTASDVALRERKLAFHIGDEPPLVTRSVVESPGRG
Sequences:
>Translated_539_residues MPEEPLKATPLSAAESLSPWTPITYPVFRMLWSTWLVANICMWMNDVAAAWMMTSMTTTPLWVALVQSASTLPVFLLGLP SGALADILDRRRYFIMTQFWIAGVATLLCIAVISDVMTPPLLLALTFANGIGLAMRWPVFAAIVPELVPRPQLPAALALN GVSMNASRIIGPLVAGALIAGAGTAWVFVLNAVLSVISGFIIMRWRRDHVPSPLGRERLVSAMRVGLQFVRQSHRLRAVL VRVSLFFLHSTALLALLPLVARNLHGGGAGTFTLLLASMGAGAIIAAMYLPRLRQMMPRDTLVLRATVLQSASTAVMALA PNIYIAVPAMLLNGMAWISCANSLSVSAQLSLPDWVRARGMSMYQMAIMGASALGAALWGQVATLTSVPTGLLVAALSGT VTMLLAQRWVTDLSIEEDLTPSRQFKVPVADVPPGAGHVVVTIEYLIDPARADDFRALMQESRRSRLRQGALDWALLRDI GNPGRYIEQIIDESWTEHLRRFDRVTASDVALRERKLAFHIGDEPPLVTRSVVESPGRG >Mature_538_residues PEEPLKATPLSAAESLSPWTPITYPVFRMLWSTWLVANICMWMNDVAAAWMMTSMTTTPLWVALVQSASTLPVFLLGLPS GALADILDRRRYFIMTQFWIAGVATLLCIAVISDVMTPPLLLALTFANGIGLAMRWPVFAAIVPELVPRPQLPAALALNG VSMNASRIIGPLVAGALIAGAGTAWVFVLNAVLSVISGFIIMRWRRDHVPSPLGRERLVSAMRVGLQFVRQSHRLRAVLV RVSLFFLHSTALLALLPLVARNLHGGGAGTFTLLLASMGAGAIIAAMYLPRLRQMMPRDTLVLRATVLQSASTAVMALAP NIYIAVPAMLLNGMAWISCANSLSVSAQLSLPDWVRARGMSMYQMAIMGASALGAALWGQVATLTSVPTGLLVAALSGTV TMLLAQRWVTDLSIEEDLTPSRQFKVPVADVPPGAGHVVVTIEYLIDPARADDFRALMQESRRSRLRQGALDWALLRDIG NPGRYIEQIIDESWTEHLRRFDRVTASDVALRERKLAFHIGDEPPLVTRSVVESPGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58549; Mature: 58418
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEEPLKATPLSAAESLSPWTPITYPVFRMLWSTWLVANICMWMNDVAAAWMMTSMTTTP CCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LWVALVQSASTLPVFLLGLPSGALADILDRRRYFIMTQFWIAGVATLLCIAVISDVMTPP HHHHHHHCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLLALTFANGIGLAMRWPVFAAIVPELVPRPQLPAALALNGVSMNASRIIGPLVAGALIA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHH GAGTAWVFVLNAVLSVISGFIIMRWRRDHVPSPLGRERLVSAMRVGLQFVRQSHRLRAVL CCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRVSLFFLHSTALLALLPLVARNLHGGGAGTFTLLLASMGAGAIIAAMYLPRLRQMMPRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH TLVLRATVLQSASTAVMALAPNIYIAVPAMLLNGMAWISCANSLSVSAQLSLPDWVRARG HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHCC MSMYQMAIMGASALGAALWGQVATLTSVPTGLLVAALSGTVTMLLAQRWVTDLSIEEDLT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRQFKVPVADVPPGAGHVVVTIEYLIDPARADDFRALMQESRRSRLRQGALDWALLRDI CCCEEECCCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPGRYIEQIIDESWTEHLRRFDRVTASDVALRERKLAFHIGDEPPLVTRSVVESPGRG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCC >Mature Secondary Structure PEEPLKATPLSAAESLSPWTPITYPVFRMLWSTWLVANICMWMNDVAAAWMMTSMTTTP CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LWVALVQSASTLPVFLLGLPSGALADILDRRRYFIMTQFWIAGVATLLCIAVISDVMTPP HHHHHHHCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLLALTFANGIGLAMRWPVFAAIVPELVPRPQLPAALALNGVSMNASRIIGPLVAGALIA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHH GAGTAWVFVLNAVLSVISGFIIMRWRRDHVPSPLGRERLVSAMRVGLQFVRQSHRLRAVL CCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRVSLFFLHSTALLALLPLVARNLHGGGAGTFTLLLASMGAGAIIAAMYLPRLRQMMPRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH TLVLRATVLQSASTAVMALAPNIYIAVPAMLLNGMAWISCANSLSVSAQLSLPDWVRARG HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHCC MSMYQMAIMGASALGAALWGQVATLTSVPTGLLVAALSGTVTMLLAQRWVTDLSIEEDLT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRQFKVPVADVPPGAGHVVVTIEYLIDPARADDFRALMQESRRSRLRQGALDWALLRDI CCCEEECCCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPGRYIEQIIDESWTEHLRRFDRVTASDVALRERKLAFHIGDEPPLVTRSVVESPGRG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA