| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786594
Identifier: 91786594
GI number: 91786594
Start: 704152
End: 704475
Strand: Reverse
Name: 91786594
Synonym: Bpro_0690
Alternate gene names: NA
Gene position: 704475-704152 (Counterclockwise)
Preceding gene: 91786599
Following gene: 91786593
Centisome position: 13.55
GC content: 67.28
Gene sequence:
>324_bases ATGACGAACCCATCTCCCGAATCAATTTCGCTACGCGCCGATCAGGCGGTCCGACGTGGCGCGGCGGTGCAGTTCCTCGT CGATGGCCGCATCGTCGAGGCGTTTGAGGGTGAGAGCGTCGCGGCGGCACTGTTCGCCGCCGGCCAGCGCGAGTTGCGGC GCAGCCCGCGCGACGGTGCGCCCCGTGGGCTGTTCTGCCTCATGGGCTCGTGCCAGGAGTGCCTCGTGTGGGTCGCAACG CGCAAGCTTGCGGCCTGCCAGGTACCGGTGACGGCTGCGCTGGAGATCGAAACGCTTTCATATCGGGACCGGTGCCATGG TTGA
Upstream 100 bases:
>100_bases CAATAACAATATTTATATATTTAATGTATACAATGAAATCCGACGAACCCGATTGGAGCTTTCCCGCTCCATCTCCCAGA CCATCCGAAGTTCCTTTTTC
Downstream 100 bases:
>100_bases GGCCGCGCCCGAGTCGATCGATCTGCTTGTGATCGGTGCCGGCCCCGCCGGCGCGCGGGCGGCGCTACGTGCGCAGGCCT GCGGTCTTGCCGTGCTGCTG
Product: hypothetical protein
Products: glycine; formaldehyde; H2O2
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTNPSPESISLRADQAVRRGAAVQFLVDGRIVEAFEGESVAAALFAAGQRELRRSPRDGAPRGLFCLMGSCQECLVWVAT RKLAACQVPVTAALEIETLSYRDRCHG
Sequences:
>Translated_107_residues MTNPSPESISLRADQAVRRGAAVQFLVDGRIVEAFEGESVAAALFAAGQRELRRSPRDGAPRGLFCLMGSCQECLVWVAT RKLAACQVPVTAALEIETLSYRDRCHG >Mature_106_residues TNPSPESISLRADQAVRRGAAVQFLVDGRIVEAFEGESVAAALFAAGQRELRRSPRDGAPRGLFCLMGSCQECLVWVATR KLAACQVPVTAALEIETLSYRDRCHG
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.5.3.1
Molecular weight: Translated: 11578; Mature: 11447
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPSPESISLRADQAVRRGAAVQFLVDGRIVEAFEGESVAAALFAAGQRELRRSPRDGA CCCCCCCCEEEEHHHHHHCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC PRGLFCLMGSCQECLVWVATRKLAACQVPVTAALEIETLSYRDRCHG CCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure TNPSPESISLRADQAVRRGAAVQFLVDGRIVEAFEGESVAAALFAAGQRELRRSPRDGA CCCCCCCEEEEHHHHHHCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC PRGLFCLMGSCQECLVWVATRKLAACQVPVTAALEIETLSYRDRCHG CCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sarcosine; H2O; O2
Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA