The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ooxA [H]

Identifier: 91786593

GI number: 91786593

Start: 702708

End: 704159

Strand: Reverse

Name: ooxA [H]

Synonym: Bpro_0689

Alternate gene names: 91786593

Gene position: 704159-702708 (Counterclockwise)

Preceding gene: 91786594

Following gene: 91786592

Centisome position: 13.54

GC content: 72.04

Gene sequence:

>1452_bases
ATGGTTGAGGCCGCGCCCGAGTCGATCGATCTGCTTGTGATCGGTGCCGGCCCCGCCGGCGCGCGGGCGGCGCTACGTGC
GCAGGCCTGCGGTCTTGCCGTGCTGCTGGTTGATGAGAACCATGACGCGGGCGGACAGGTGTGGCGGCCGATTCCCGCGG
GATTCACACGTGCGACCGGCACCGCGCTGTCCGCAGACGCGCGCCAGGGGGATGCCTTGCGCGCGGATCTGCGCCGCGCC
GGCGTGCGCTGCCTCTTCGGCCACAAGGTGTGGAACGTTGGCACGAACCTTCGCACAGACCTGATCGGCCCGGATGGATC
CGCAAGCTGGCAACCGCGCGCGCTGCTCGTGGCGACAGGAACGACCGAGCGTGTCGTGCCCTTCCCCGGCTGGACCTTGC
CTGGCGTGATGGGCCTGGCCGCGGCGACGATCCTGCTCAAGTCCCAAAACATGCTGCCCGGCCGCCGCACCATGGTAGCC
GGCAGCGGGCCGCTGCTACTGGCGGTCGCCAACGGCATCCTCAAGGCGGGCGGCGAGGTGGCTGCGGTGCTCGACCTCGC
CAGCAAGGGCGATTGGCTGCGCACGCTCCCTTCGCTCGCGGGTCGGCCCGATCTGTTGTGGCAAGGCGTGCGATGGCAAG
CCGGGCTGCGCATGGCTGGCGTGCCTGTGCTGTACCGGCACGGCATCCAGTCGGTCGAAGCGGTGGGCGATGGGTTCGAG
GTTCGTTCGCAGCGTGTCGATGCGACCGGCAAACCACTCGCCGGCGATGCGGCCACTGTCTTCATGGCCGACGGCGTGAC
GGTCGGGCACGGCCTGGTGCCGGGCACCGACGTGACCCGTCTGCTGCGCGCCCGCCATCGCTACGCCGCCGAGCGCGGCG
GCTGGATCGCCGACGCCGACACCGATGGCCGCACTTCGGTGGCAGGCCTTTATGTCGCGGGCGACGGTGCCGGCATCGCC
GGCGCAGCCGCGGCCGGTGCCCATGGCGAACTGGCCGCCCTGGCCTGCGCGCACGACCTCGGCCGGGTGACGACAGAGGC
CTATGTCCGCGAGCGCGATCGCCTGCAAGCGCAATGGCGCAAGTCTGCCCGTTTCGGGCGCGCCATGGCCGGCCTGATGG
CCTTGCGCGACGGCGCCGTCGCGGGCATCGCGGCCGACACCATCGTGTGCCGCTGCGAAGACGTGACGCGCGCCGAGATC
GACGCGGCGGCGCGCGACGGCGCACGTGACATGAACCAGCTCAAGGCCTGGACCCGCTGCGGCATGGGGCCGTGCCAGGG
CCGCACCTGCGGCGACGTGGCCGGGGCATTGCTCGCGGCGCAGGTCGGCGGCAGCCGCGAGGCGGTCGGTCGCTTCACGG
GCCGCGCGCCGCTGCGCCCCATTTCGCTCGCCGAGGTGGCGGGCGACTACACCTACGCCGACATCCCGATTCCGAAGGCG
GCTCCGCTATGA

Upstream 100 bases:

>100_bases
GAGTGCCTCGTGTGGGTCGCAACGCGCAAGCTTGCGGCCTGCCAGGTACCGGTGACGGCTGCGCTGGAGATCGAAACGCT
TTCATATCGGGACCGGTGCC

Downstream 100 bases:

>100_bases
GCAACGCCACGCACAACGCAACCGCCTACGACGCGATCGTCATCGGCGGCGGCGTCATGGGTTGCTCGACCGCGTTGCAT
CTGGCGCAGGGCGGCATGCG

Product: BFD-like protein

Products: NA

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MVEAAPESIDLLVIGAGPAGARAALRAQACGLAVLLVDENHDAGGQVWRPIPAGFTRATGTALSADARQGDALRADLRRA
GVRCLFGHKVWNVGTNLRTDLIGPDGSASWQPRALLVATGTTERVVPFPGWTLPGVMGLAAATILLKSQNMLPGRRTMVA
GSGPLLLAVANGILKAGGEVAAVLDLASKGDWLRTLPSLAGRPDLLWQGVRWQAGLRMAGVPVLYRHGIQSVEAVGDGFE
VRSQRVDATGKPLAGDAATVFMADGVTVGHGLVPGTDVTRLLRARHRYAAERGGWIADADTDGRTSVAGLYVAGDGAGIA
GAAAAGAHGELAALACAHDLGRVTTEAYVRERDRLQAQWRKSARFGRAMAGLMALRDGAVAGIAADTIVCRCEDVTRAEI
DAAARDGARDMNQLKAWTRCGMGPCQGRTCGDVAGALLAAQVGGSREAVGRFTGRAPLRPISLAEVAGDYTYADIPIPKA
APL

Sequences:

>Translated_483_residues
MVEAAPESIDLLVIGAGPAGARAALRAQACGLAVLLVDENHDAGGQVWRPIPAGFTRATGTALSADARQGDALRADLRRA
GVRCLFGHKVWNVGTNLRTDLIGPDGSASWQPRALLVATGTTERVVPFPGWTLPGVMGLAAATILLKSQNMLPGRRTMVA
GSGPLLLAVANGILKAGGEVAAVLDLASKGDWLRTLPSLAGRPDLLWQGVRWQAGLRMAGVPVLYRHGIQSVEAVGDGFE
VRSQRVDATGKPLAGDAATVFMADGVTVGHGLVPGTDVTRLLRARHRYAAERGGWIADADTDGRTSVAGLYVAGDGAGIA
GAAAAGAHGELAALACAHDLGRVTTEAYVRERDRLQAQWRKSARFGRAMAGLMALRDGAVAGIAADTIVCRCEDVTRAEI
DAAARDGARDMNQLKAWTRCGMGPCQGRTCGDVAGALLAAQVGGSREAVGRFTGRAPLRPISLAEVAGDYTYADIPIPKA
APL
>Mature_483_residues
MVEAAPESIDLLVIGAGPAGARAALRAQACGLAVLLVDENHDAGGQVWRPIPAGFTRATGTALSADARQGDALRADLRRA
GVRCLFGHKVWNVGTNLRTDLIGPDGSASWQPRALLVATGTTERVVPFPGWTLPGVMGLAAATILLKSQNMLPGRRTMVA
GSGPLLLAVANGILKAGGEVAAVLDLASKGDWLRTLPSLAGRPDLLWQGVRWQAGLRMAGVPVLYRHGIQSVEAVGDGFE
VRSQRVDATGKPLAGDAATVFMADGVTVGHGLVPGTDVTRLLRARHRYAAERGGWIADADTDGRTSVAGLYVAGDGAGIA
GAAAAGAHGELAALACAHDLGRVTTEAYVRERDRLQAQWRKSARFGRAMAGLMALRDGAVAGIAADTIVCRCEDVTRAEI
DAAARDGARDMNQLKAWTRCGMGPCQGRTCGDVAGALLAAQVGGSREAVGRFTGRAPLRPISLAEVAGDYTYADIPIPKA
APL

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 49982; Mature: 49982

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAAPESIDLLVIGAGPAGARAALRAQACGLAVLLVDENHDAGGQVWRPIPAGFTRATG
CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEECCCCCCCCCCCC
TALSADARQGDALRADLRRAGVRCLFGHKVWNVGTNLRTDLIGPDGSASWQPRALLVATG
CEEECCCCCCHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCCCCCCCCCEEEEEEC
TTERVVPFPGWTLPGVMGLAAATILLKSQNMLPGRRTMVAGSGPLLLAVANGILKAGGEV
CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHHHHHCCCCE
AAVLDLASKGDWLRTLPSLAGRPDLLWQGVRWQAGLRMAGVPVLYRHGIQSVEAVGDGFE
EEEEEHHCCCCHHHHHHHHCCCCHHHCCCCCHHCCCEECCCHHHHHHCHHHHHHHCCCHH
VRSQRVDATGKPLAGDAATVFMADGVTVGHGLVPGTDVTRLLRARHRYAAERGGWIADAD
HHHHHCCCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC
TDGRTSVAGLYVAGDGAGIAGAAAAGAHGELAALACAHDLGRVTTEAYVRERDRLQAQWR
CCCCCEEEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSARFGRAMAGLMALRDGAVAGIAADTIVCRCEDVTRAEIDAAARDGARDMNQLKAWTRC
HHHHHHHHHHHHHHHHCCCEECEECCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHC
GMGPCQGRTCGDVAGALLAAQVGGSREAVGRFTGRAPLRPISLAEVAGDYTYADIPIPKA
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCC
APL
CCC
>Mature Secondary Structure
MVEAAPESIDLLVIGAGPAGARAALRAQACGLAVLLVDENHDAGGQVWRPIPAGFTRATG
CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEECCCCCCCCCCCC
TALSADARQGDALRADLRRAGVRCLFGHKVWNVGTNLRTDLIGPDGSASWQPRALLVATG
CEEECCCCCCHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCCCCCCCCCEEEEEEC
TTERVVPFPGWTLPGVMGLAAATILLKSQNMLPGRRTMVAGSGPLLLAVANGILKAGGEV
CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHHHHHCCCCE
AAVLDLASKGDWLRTLPSLAGRPDLLWQGVRWQAGLRMAGVPVLYRHGIQSVEAVGDGFE
EEEEEHHCCCCHHHHHHHHCCCCHHHCCCCCHHCCCEECCCHHHHHHCHHHHHHHCCCHH
VRSQRVDATGKPLAGDAATVFMADGVTVGHGLVPGTDVTRLLRARHRYAAERGGWIADAD
HHHHHCCCCCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC
TDGRTSVAGLYVAGDGAGIAGAAAAGAHGELAALACAHDLGRVTTEAYVRERDRLQAQWR
CCCCCEEEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSARFGRAMAGLMALRDGAVAGIAADTIVCRCEDVTRAEIDAAARDGARDMNQLKAWTRC
HHHHHHHHHHHHHHHHCCCEECEECCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHC
GMGPCQGRTCGDVAGALLAAQVGGSREAVGRFTGRAPLRPISLAEVAGDYTYADIPIPKA
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCC
APL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA