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The map label for this gene is ybaO [C]

Identifier: 91786578

GI number: 91786578

Start: 686188

End: 686685

Strand: Reverse

Name: ybaO [C]

Synonym: Bpro_0674

Alternate gene names: 91786578

Gene position: 686685-686188 (Counterclockwise)

Preceding gene: 91786580

Following gene: 91786576

Centisome position: 13.2

GC content: 62.05

Gene sequence:

>498_bases
ATGGAACAAATATCGATAGACGAAACAGACCTCAAGTTGCTGGACAGCCTGCAGACCGATGCATCGCTGAGCAACCAGGC
TTTGGCCGAACGCGTTCATATCTCGCCGCCTACCTGTTTGCGCCGCGTCAAGCGCCTGCGCGATGCGGGACTGATCGAGC
GGGAAGTGGCCCTGCTCAGCGGCGACAAGCTGGCCGCCCTGCTGGGGCACGGCCTGACCGCGATTGTCGAGATCACGCTC
GACCGTCAAGGCGCCGAGCATCTGGATGCCTTTGAGCTGCGGGTAGCGGCCGATGCGGCCGTGCAGCAGTGCTACCGGGT
GTCGCCGGGGCCAGACTTTGTGCTGATGGTGCACGTGGCCGACATGCCCAGCTACCTGGCGCTGGCGCAGCGGCTTTTTA
CCAGCGACGCCAATGTGCGCAACGTCAAGGCCTTCTTCAGCACCAAGCGGGCCAAGTTCGAACCCAAAGTGCTGCTGGCC
TCAATACGGTTCAGTTAA

Upstream 100 bases:

>100_bases
CGTGCATGTTGTTTTCTTATGTGATTGATTTTTCTTGATTTATGGAATTTAATTTCAATATTCTTTGATAATTGAATTTA
ATTCCATTTACAGTAATTTT

Downstream 100 bases:

>100_bases
GCCCTTGCCCCTGGTTTGTCATCCCGGACCCCGGATCAAGTCCGGGGCAGGCCCGATCCGGGATCCATGGATTGCGCGGG
TCAGGCCCGCAATGACAAGT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MEQISIDETDLKLLDSLQTDASLSNQALAERVHISPPTCLRRVKRLRDAGLIEREVALLSGDKLAALLGHGLTAIVEITL
DRQGAEHLDAFELRVAADAAVQQCYRVSPGPDFVLMVHVADMPSYLALAQRLFTSDANVRNVKAFFSTKRAKFEPKVLLA
SIRFS

Sequences:

>Translated_165_residues
MEQISIDETDLKLLDSLQTDASLSNQALAERVHISPPTCLRRVKRLRDAGLIEREVALLSGDKLAALLGHGLTAIVEITL
DRQGAEHLDAFELRVAADAAVQQCYRVSPGPDFVLMVHVADMPSYLALAQRLFTSDANVRNVKAFFSTKRAKFEPKVLLA
SIRFS
>Mature_165_residues
MEQISIDETDLKLLDSLQTDASLSNQALAERVHISPPTCLRRVKRLRDAGLIEREVALLSGDKLAALLGHGLTAIVEITL
DRQGAEHLDAFELRVAADAAVQQCYRVSPGPDFVLMVHVADMPSYLALAQRLFTSDANVRNVKAFFSTKRAKFEPKVLLA
SIRFS

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=148, Percent_Identity=35.8108108108108, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787116, Length=156, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18200; Mature: 18200

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQISIDETDLKLLDSLQTDASLSNQALAERVHISPPTCLRRVKRLRDAGLIEREVALLS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
GDKLAALLGHGLTAIVEITLDRQGAEHLDAFELRVAADAAVQQCYRVSPGPDFVLMVHVA
CCHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
DMPSYLALAQRLFTSDANVRNVKAFFSTKRAKFEPKVLLASIRFS
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MEQISIDETDLKLLDSLQTDASLSNQALAERVHISPPTCLRRVKRLRDAGLIEREVALLS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
GDKLAALLGHGLTAIVEITLDRQGAEHLDAFELRVAADAAVQQCYRVSPGPDFVLMVHVA
CCHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
DMPSYLALAQRLFTSDANVRNVKAFFSTKRAKFEPKVLLASIRFS
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]