| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786570
Identifier: 91786570
GI number: 91786570
Start: 677981
End: 678496
Strand: Reverse
Name: 91786570
Synonym: Bpro_0665
Alternate gene names: NA
Gene position: 678496-677981 (Counterclockwise)
Preceding gene: 91786572
Following gene: 91786569
Centisome position: 13.05
GC content: 65.7
Gene sequence:
>516_bases ATGGCGACTCCCAAAGACGATTTTGCAATCTACTGCTGTGAACTGCTGTCCGGCGTCGGGCCGTGCGTTGCCAGGCGCAT GTTTGGCGGCTACGGCATCAGCACCTCAGGCCTGACGCTGGCGCTGGTGGCCGATCTCGGGGGCGGGGAAAAGCTCTGGC TCAAGGCCGATGCAGATACCCGCGGCCGGTTTGAAGCCGCGGGCTGTGAACGGTTTACCTATGACATCACCCGAAACGGC GAGCGCTTGGCGCACAGCCTGAATTATTACAGCGCCCCCGAGGAGGCGATGGAGTCCGCTCAGTTGATGCTGCAGTGGGC GCGGGTGTCTCTCGATTGCGCGTTGAAAGCGCGTTCTGCCAAATCACCGCGGGCCCGGGTCGCCAGAAAAACCACCGCAA AACCGGTCAGCGCAACCTCGACCGCCGCCGCCACACCGCCGGCCAGGCCACGGGCCAGCCGGCCCACCGCACCGCCCACC AGGCCGAGCGCCAGGCGCAAGTCAAGCAGGGGCTGA
Upstream 100 bases:
>100_bases TTAAACCACTACCCATGCGGCCACATGGGAAAGCATCGAACACTCACCCTTTCGTGAAGGTTTCGCCACGGTTTCGCCGG GCTTGCGCTAAGGTTGCGGT
Downstream 100 bases:
>100_bases ACCACGCCCGCGCGCCAGCCTGTGGCCTTCGCCGGCACGGGGTGGGCGGCCGCCGCGGGCTCCCAGTTGAAGTAGGCCGA CGACGCATGCCCCACGCCAA
Product: TfoX-like protein
Products: NA
Alternate protein names: TfoX Domain Protein; TfoX-Like Protein; TfoX-Like; TfoX N-Terminal; DNA Transformation Protein TfoX; TfoX N-Terminal Domain Protein; Regulator Of Competence-Specific Genes-Like Protein; TfoX N-Terminal Domain Superfamily; Regulator Of Competence-Specific Gene
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNG ERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPT RPSARRKSSRG
Sequences:
>Translated_171_residues MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNG ERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPT RPSARRKSSRG >Mature_170_residues ATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNGE RLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTR PSARRKSSRG
Specific function: Unknown
COG id: COG3070
COG function: function code K; Regulator of competence-specific genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18325; Mature: 18194
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADT CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC RGRFEAAGCERFTYDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSA CCCEECCCCCEEEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTRPSARRKSSRG CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC >Mature Secondary Structure ATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADT CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC RGRFEAAGCERFTYDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSA CCCEECCCCCEEEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC KSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTRPSARRKSSRG CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA