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The map label for this gene is nodJ [H]

Identifier: 91786537

GI number: 91786537

Start: 638939

End: 639763

Strand: Reverse

Name: nodJ [H]

Synonym: Bpro_0632

Alternate gene names: 91786537

Gene position: 639763-638939 (Counterclockwise)

Preceding gene: 91786538

Following gene: 91786536

Centisome position: 12.3

GC content: 63.15

Gene sequence:

>825_bases
ATGTCTGCCGTACCCCACACCCCAACGAGAGGACAGGCGCTGTTCAGACCACCGCAAATCGGCCTGCGCTGGCTGCCCGT
CTTCCGCCGCAACCTGCTGGTCTGGCGCAAGCTGGCCATTCCCAGCCTCGTCGGCAACATCGCCGAGCCGCTGATCACGC
TGGTGGCCTTCGGCTACGGGCTCGGCGCACTGGTCGGGCAGGTGCAGCTCAACGGCACGACCGTGCCCTACATCCTGTTC
CTGGCCAGCGGTTCGATTTGCATGAGTGCGATGAACGCCGCGTCGTTTGAGGCGCTGTATTCGGCGTTTTCGCGCATGCA
GGTGCAGCGCACCTGGGACGGCATCATGAATGCGCCGGTGCGGCTCGATGACGTGGTGTTTGCCGAAATGCTGTGGGCCG
CCTTCAAGTCGCTGTTCACCACCAGCATCATCCTGGTGGTGATGCTGGCGCTGGGCATCAGCCACAGCCCCATGCTGCTG
CTGGCCTGGCCGCTGCTCGGCTTAGTGGGCATTACCTTCTCCAGCATTGCGCTGATCTTCAACGCACTGGCCAAGGGCTA
TGACTTTTTCACCTACTACTTCACGCTGTTTCTCACGCCGACGATGTTCCTGAGCGGCGTGTTTTTCCCACGCGACCAGT
TGCCGGGCGTGATGCGGGTGATCTCGGACTGGCTGCCGCTGACGGCGGCGGTGGAGCTGGTGCGCCCCTTGTTTCTGGGC
CAATGGCCCACGCAGGGGTTGTCGCACCTGGCGTTGCTGGTGGGGTATGCGGTGGCGGGTTTCTGGGTTGCGCTGGTGCT
GACGCGCAAGCGGTTTCGTAACTAA

Upstream 100 bases:

>100_bases
CGCTGACAGACTTTCCGCAGTTGCGCACGCTGCACCGCCCGGCCAATCTTGAGGACCTGTTCCTGAAGCTCACCGGCCGG
CAAATCAGGGAGGATGCGTG

Downstream 100 bases:

>100_bases
GCAGGTGGTGGCACCTCAACGCTCCTACAATTTGGCCGCATGAACGCTGCCATGCCCGATACACCGGCGCCGCTGCTGCC
GCCAGAGCTCGTCACCATGA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSAVPHTPTRGQALFRPPQIGLRWLPVFRRNLLVWRKLAIPSLVGNIAEPLITLVAFGYGLGALVGQVQLNGTTVPYILF
LASGSICMSAMNAASFEALYSAFSRMQVQRTWDGIMNAPVRLDDVVFAEMLWAAFKSLFTTSIILVVMLALGISHSPMLL
LAWPLLGLVGITFSSIALIFNALAKGYDFFTYYFTLFLTPTMFLSGVFFPRDQLPGVMRVISDWLPLTAAVELVRPLFLG
QWPTQGLSHLALLVGYAVAGFWVALVLTRKRFRN

Sequences:

>Translated_274_residues
MSAVPHTPTRGQALFRPPQIGLRWLPVFRRNLLVWRKLAIPSLVGNIAEPLITLVAFGYGLGALVGQVQLNGTTVPYILF
LASGSICMSAMNAASFEALYSAFSRMQVQRTWDGIMNAPVRLDDVVFAEMLWAAFKSLFTTSIILVVMLALGISHSPMLL
LAWPLLGLVGITFSSIALIFNALAKGYDFFTYYFTLFLTPTMFLSGVFFPRDQLPGVMRVISDWLPLTAAVELVRPLFLG
QWPTQGLSHLALLVGYAVAGFWVALVLTRKRFRN
>Mature_273_residues
SAVPHTPTRGQALFRPPQIGLRWLPVFRRNLLVWRKLAIPSLVGNIAEPLITLVAFGYGLGALVGQVQLNGTTVPYILFL
ASGSICMSAMNAASFEALYSAFSRMQVQRTWDGIMNAPVRLDDVVFAEMLWAAFKSLFTTSIILVVMLALGISHSPMLLL
AWPLLGLVGITFSSIALIFNALAKGYDFFTYYFTLFLTPTMFLSGVFFPRDQLPGVMRVISDWLPLTAAVELVRPLFLGQ
WPTQGLSHLALLVGYAVAGFWVALVLTRKRFRN

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30334; Mature: 30202

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAVPHTPTRGQALFRPPQIGLRWLPVFRRNLLVWRKLAIPSLVGNIAEPLITLVAFGYG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGALVGQVQLNGTTVPYILFLASGSICMSAMNAASFEALYSAFSRMQVQRTWDGIMNAPV
HHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLDDVVFAEMLWAAFKSLFTTSIILVVMLALGISHSPMLLLAWPLLGLVGITFSSIALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NALAKGYDFFTYYFTLFLTPTMFLSGVFFPRDQLPGVMRVISDWLPLTAAVELVRPLFLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
QWPTQGLSHLALLVGYAVAGFWVALVLTRKRFRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]