| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786525
Identifier: 91786525
GI number: 91786525
Start: 628105
End: 629073
Strand: Reverse
Name: 91786525
Synonym: Bpro_0620
Alternate gene names: NA
Gene position: 629073-628105 (Counterclockwise)
Preceding gene: 91786526
Following gene: 91786524
Centisome position: 12.1
GC content: 67.6
Gene sequence:
>969_bases ATGAAACGTCGGTCGCTGCTGCTCGCCAGCCTTCTCATGTCTGCAGCCGGGTGGTGCGCGGCGCAGGGTGCCTGGCCCGC CAAACCCATCACCATGATCGTGCCCTTCCCGCCTGGCGGTCTGGCCGACCTGGTGGCGCGGCCTGTGGCTGAAGCGATGT CGCGGGAGCTGGGGCAGCCGGTGGTGATCGAGAACAAGGCCGGCGCCGGCGGCGGCATTGGCATGGGCATGGCCGCCAAG GCCAAACCCGATGGCTACACCGTCCTGCTGGCGCTGTCGTCGCTGACCGTCATCCCCGAAGCCGATACCCTGCTGGGTCG GCCCGCCATGTTTGCCCTGCCCGACCTGCGGCCGATTGCCCGCTTCACGGCCGACCCCACGGTACTGGCCGTGCGTGCCG ATGCGCCCTGGAAAACCGCGCAGCAGTTCATTGACGATGCCAAAAAACGCCCCGGCGCCATCAACTACGGCTCCTCGGGC AACTACGGCACCATGCATGTGCCGATGGAAATCCTGGCGCAAACGGCCGGCATAAAAATGACGCACGTGCCGTTTACCGG CGCCGGCCCGGCCGTGGTGGCGCTGCTGGGCGGCCAGATTGATGCGGTGTCATCCGGGCCCGCCACCGTGCTGCAGCAGG TCAAGGCCGGCAAGCTGCGCGTGCTGGCGCATTGGGGCAACGGCGCGCTGAGCACGCTGCCCGAGGTACCCAGCCTGAAG GACGCCGGCTTCAACGCCGAGTATGCGCAGTGGTCGGGGCTGTTCATCCCGCAGGCCACGCCGGAGCCGATTGCCCAGCG CCTGCGCGCCGCGGCGAAGGCCGCCGCACAGGACGCCCGCGTCAAGGAAGTGATTCTGGGTGCGGGCAGCCCGGTGCTGT ACCAGGACAGCCCGGACTTCGAAATGTATGTAAAGGAAGATGCCAAGCGCATGGCGGAGGTCGTCAAGCGCATCGGCAAG GTGGAATAG
Upstream 100 bases:
>100_bases CTAGGGATTGCGATGAGGCCAAAACCGCGGTCAGACGTTAGCATGCTTCCATTAGCCCCTCCGAATCCGTCGGAGCTTGC CGCTCTACAAGGAACATTGC
Downstream 100 bases:
>100_bases AGCTACCCTGCCCCTGCTTTCTCCGTCTCACTGTTCACTGTTCACTTTTCACCTCGCCCCCGCCCCGCCATTCCCGGCCC TGTTTTCCCACTGGAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK VE
Sequences:
>Translated_322_residues MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK VE >Mature_322_residues MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK VE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33724; Mature: 33724
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQP CCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC VVIENKAGAGGGIGMGMAAKAKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIA EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHCCCHHEECCCCHHHH RFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSGNYGTMHVPMEILAQTAGIKM HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHCCCEE THVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK EECCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCC DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDF CCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH EMYVKEDAKRMAEVVKRIGKVE HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQP CCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC VVIENKAGAGGGIGMGMAAKAKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIA EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHCCCHHEECCCCHHHH RFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSGNYGTMHVPMEILAQTAGIKM HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHCCCEE THVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK EECCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCC DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDF CCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH EMYVKEDAKRMAEVVKRIGKVE HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]