Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is namA [H]

Identifier: 91786499

GI number: 91786499

Start: 596741

End: 599074

Strand: Reverse

Name: namA [H]

Synonym: Bpro_0593

Alternate gene names: 91786499

Gene position: 599074-596741 (Counterclockwise)

Preceding gene: 91786500

Following gene: 91786498

Centisome position: 11.52

GC content: 64.27

Gene sequence:

>2334_bases
ATGCACATCCTTTGCCTTGGCGGCGGCCCCGCAGGTCTGTATTTCGCCCTGTTGATGAAGCTGCAGAACCCGGCACACCA
GGTGACCGTGGTTGAACGCAACCGTCCCTTTGACACCTTTGGCTGGGGCGTGGTGCTGTCAGACCAGACGCTGGGCAATC
TGCGGGTGGCCGACCCGGTCAGCGCGCAGCTGATTGGCGACGCCTTCAACCACTGGGATGATGTGGAGGTGTTCTTCAAG
GGCCGCAGCGTGCGTTCGGGTGGCCATGGTTTTTGCGGCATCGGCCGCAAGCGCCTGCTCAATATCCTGCAAGAGCGCTG
CCTGGCACTGGGTGTCGAACTGGTGTTTGAAACCGACGTGCAGGACGACCAGGCAATTGCCGCGCAGTACCAGGCTGACC
TGGTGGTGGCCAGCGACGGGCTGAACAGCCGCATCCGCAACCGCTACGCGGAGACCTTCAAGCCCGATGTCGAGCTGCGC
GCCTGCCGCTTTGTCTGGCTGGGTACGCGCAAGACCTTCGACGCCTTCACCTTCGCGTTCGAGAAAACCGAGCACGGCTG
GTTTGCCGCGCACGCCTACAAGTTTGACGAGAACACCTCGACCTTCATCGTCGAAACCCCCGAAGCCGTCTGGAAGGCCC
ATGGCCTGGACCAGATGAGCCAGGAGGAAGGCATCGCCTTTTGCGAGCGCCTGTTTGCCAAATACCTGGACGGCAATGCC
CTGATGAACAATGCCACGCATGTGCGCGGCTCGGCGATCTGGATCCGCTTTCCGCGCGTGGTCTGCGAGCGCTGGGTGCA
CCACGAAACCGTGGAGGGAAAGCGCGTGCCCATCGTGCTCATGGGCGACGCGGCCCACACCGCGCATTTCTCGATTGGCA
GCGGCACCAAGCTGGCGCTCGAAGACGCGATCGACCTGGCGAATGAATTCAGCGCGAGCGCTGAGGAATTCAACACCGGC
CACGGCATGGACGAGGTACTGCAGGCTTATGAGGCGCGGCGCTCCGTCGAGGTGCTGAAGATCCAGAACGCGGCGCGCAA
CTCCACCGAGTGGTTCGAGAACGTCAACCGCTACAGCGGCATGGAGATCGAGCAGTTCGCCTATTCGCTGCTGACCCGCT
CACAGCGCATCAGCCACGAAAACCTGCGGCTGCGCGATGCGAAATGGATCGAAAGCTATGAATCCTGGCTGTCGGGCGGC
CCGGTGATTCCGCCGATGCTGACGCCGTTCAAGGTGCGCGGCACCGAGCTCAAGAACCGCATTGTGTGCTCGCCGATGGC
AACCTACAGCGCCATTGACGGTGTGCCGCAAGACTTTCATCTGGTGCACCTGGGCGCGCGCGCGCTCGGCGGCGCCGCCA
TGGTGATGGTGGAGATGACCAGCCCGAATCCCGAGGGCCGCATCACACCGGCCTGCACCGGGCTGTGGAACGACGAGCAA
ACAGCCGCCTTCAAGCGGATTGTGGATTTCGTGCACGGCCAGAGCACGGCCAAAATCGGCATGCAGCTCGGCCACAGCGG
CCCCAAGGGCTCGACCCAGGTGGGCTGGGAAGAGATGGATGAACCGCTGCCCGCAGGGGGCGCGCATGCCAACTGGCCGG
TGGTGTCGGCCAGCGCCGTGCCCTATGGCGAGCGCAACCAGACGCCACAGGCCATGACGCACAGCCACATGGAAACGCTC
AAGCAGCAGTTTGTGGACGCCACCCGGCGCGCCGCCGCCGCCGGCTTCGACTGGCTGGAACTGCACTGCGCGCACGGCTA
CCTGCTGTCGGCCTTCATCACGCCGCTGACCAATCTGCGCAGCGACGAGTACGGCGGCAACATCGAGAACCGCTGCCGCT
ACCCGCTGGAGGTGTTTCGCGCCATGCGCGCGGTCTGGCCCGCACACCTGCCCATGAGCGTGCGCATCTCCGCGCACGAC
TGGGCGCCGGGCGGCAACACGCCCGACGACGCGATCGTGGTGGCCCGGTTGTTCAAGGACGCGGGCTGCGATGTGATCGA
CGTGTCCTCGGGCCAAACCACGCGCCAGGCCAAACCGGTGTATGGCCGCATGTACCAGACGCCGTTTGCCGACCGCATCC
GCAATGAGGTCGGCATACAGACCATTGCGGTGGGTGCAATTTCCGAAGTCGACCATGTCAACAGCATCATTGCCGCCGGC
CGTGCCGACCTGTGCGCGCTGGCCCGACCGCACCTGGCCGATCCGGCCTGGACGCTGCACGAAGCCGCCAAGCTGCAAAG
CCAGGCCGTGGACTGGCCCAAACAGTACCTGAGCGGCCGGGATCAGCTGTACCGTGAAATTTCAAAACAACAAGCGCTTG
CGGCCCAGTCATGA

Upstream 100 bases:

>100_bases
TGGCCGGAAAGCCGCCATGGCCGGCCGGTAAAAAACCGCTTGACGAATTTACTTTAAACCTAAACAATTAAGGTCAGATT
AATCGAACGAGCACACATTC

Downstream 100 bases:

>100_bases
CCAAGGCAGGCAGCCTTCAGGAAAACAGCAGAACAAAAAGGAGCAGCTCTATGGACATGGAAGCACGAGGCCACAGCGAA
CACCCCGAAGCCCTGCGGCT

Product: salicylyl-CoA 5-hydroxylase

Products: NA

Alternate protein names: Xenobiotic reductase [H]

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK
GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR
ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA
LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG
HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG
PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ
TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL
KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD
WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG
RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS

Sequences:

>Translated_777_residues
MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK
GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR
ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA
LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG
HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG
PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ
TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL
KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD
WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG
RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS
>Mature_777_residues
MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK
GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR
ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA
LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG
HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG
PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ
TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL
KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD
WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG
RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787939, Length=361, Percent_Identity=27.1468144044321, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1789463, Length=337, Percent_Identity=24.3323442136499, Blast_Score=99, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17559802, Length=280, Percent_Identity=31.7857142857143, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17565138, Length=213, Percent_Identity=32.8638497652582, Blast_Score=101, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17564188, Length=271, Percent_Identity=28.7822878228782, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17559804, Length=278, Percent_Identity=26.6187050359712, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI72001454, Length=273, Percent_Identity=27.4725274725275, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17540738, Length=270, Percent_Identity=27.4074074074074, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17566914, Length=128, Percent_Identity=33.59375, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325086, Length=230, Percent_Identity=29.5652173913043, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321973, Length=226, Percent_Identity=27.8761061946903, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN [H]

EC number: =1.6.99.1 [H]

Molecular weight: Translated: 86192; Mature: 86192

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00383 TYR_PHOSPHATASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPV
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCH
SAQLIGDAFNHWDDVEVFFKGRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDV
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCC
QDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELRACRFVWLGTRKTFDAFTFAF
CCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHEEE
EKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA
ECCCCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLAL
HCCCCCEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEHH
EDAIDLANEFSASAEEFNTGHGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSG
HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHCC
MEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGGPVIPPMLTPFKVRGTELKNR
CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCE
IVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ
EEECCHHHHHHHCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCHHCCCCCCCHH
TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC
PYGERNQTPQAMTHSHMETLKQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHCC
SDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHDWAPGGNTPDDAIVVARLFKD
CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
AGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG
CCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC
RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS
CHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPV
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCH
SAQLIGDAFNHWDDVEVFFKGRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDV
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCC
QDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELRACRFVWLGTRKTFDAFTFAF
CCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHEEE
EKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA
ECCCCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLAL
HCCCCCEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEHH
EDAIDLANEFSASAEEFNTGHGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSG
HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHCC
MEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGGPVIPPMLTPFKVRGTELKNR
CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCE
IVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ
EEECCHHHHHHHCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCHHCCCCCCCHH
TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC
PYGERNQTPQAMTHSHMETLKQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHCC
SDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHDWAPGGNTPDDAIVVARLFKD
CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
AGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG
CCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC
RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS
CHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA