| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786491
Identifier: 91786491
GI number: 91786491
Start: 589530
End: 590555
Strand: Reverse
Name: 91786491
Synonym: Bpro_0585
Alternate gene names: NA
Gene position: 590555-589530 (Counterclockwise)
Preceding gene: 91786493
Following gene: 91786490
Centisome position: 11.36
GC content: 68.42
Gene sequence:
>1026_bases ATGCCTGATGGGGTCTGTCATCGAATATCAGTCCGCCGGTTTTTTATCGCCGCTGCCGCAACGGCAGCCGCGGGCCTGTT GGCGGTGGGCACGTCCGCGCTCGCCCAGTCCCCCTACCCGAACCGCCCCATCGTCATGATCGTGCCGCAGGCCGCCGGCG GCACCAACGACATCGTGGGCCGGCTGGTCAGCCAGAAACTCGGCGAGGTGTTGAACACCCCGGCCGTCGTGGAGAATCGC CCCGGCGCCGGCGGAAACATCGGCACCCAGGCGGCGGCCAAGGCGCCGAAAGACGGCTACACCCTGCTCATGACCATCAG CAGCAGCCAGGCCATCAACCCGGCGCTCTACAAGAATGCCGGTTTCGATCCGGTCCGCGATTTCAAACCCGTCAGCCTGA TTGGCGCCGTGCCCAATGTGCTGCTGGTGCACCCTTCGTTTCCGGCGAAGTCGGTCGCCGAGCTGGCCGCGCTGGCCAAC AAGGGCAAACCGGGCCAGTACCAGTACGCCTCGGCCGGCAACGGCACGCTGAACCACCTGCTGGGTGAAATGCTGGGCAG CATGGCCGGCATCAACCTGCAGCATGTGCCCTACAAGGGCGTGGCCCCGGCGCTGAACGACGTGCTGGGCGGGCAGCTGC CCATGCTGTTTGCCAGCCTGCCGTCCGCGCTGTCGCACATCAAGGCGGGCAAGCTGCGTGCGCTGGCCGTCAGCGGCGCC AACCGCTCGCCGGTGCTGCCCGATGTGCCGACCATTGCCGAAACCGTGCCCGGCTACAACGGCACGCTGTGGATCGGCCT GTTCGCCCCCGCCGGCGTGCCGCCGGACGTGCTGGCCCGGCTGCAGGACGGCATGGCCAAAGCGCTGGCCGCCAAAGACC TGCGCGACAAGCTGGAGCAGCAGGGCGTCGAACTGGCGGGCCCGCCCGAGCGGCCGGTGACGCCGGAGCAGTTCGCCGCG GTGCTCAACGACGACATCGCCAAATGGGCGCGCATCGTCAAGTCCTCCGGCGCCTCGGTCGATTGA
Upstream 100 bases:
>100_bases CCGGCAAGCCTTCAATAAATCCGAAGCCTTGGTTTGAAAATCAGTGATTGCGCTGGGGAGTGGCTGCGGCGACCATACGG ACCTTCAAGGAGACAAAAGA
Downstream 100 bases:
>100_bases CCCTGTGAATTGATTCTGGACTGCCCTGAACTTCAACCTCGCACCCACCCCCACCTGATCATGAGCACTGACATCCGCAC CCTCGACGCCGCCACCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPDGVCHRISVRRFFIAAAATAAAGLLAVGTSALAQSPYPNRPIVMIVPQAAGGTNDIVGRLVSQKLGEVLNTPAVVENR PGAGGNIGTQAAAKAPKDGYTLLMTISSSQAINPALYKNAGFDPVRDFKPVSLIGAVPNVLLVHPSFPAKSVAELAALAN KGKPGQYQYASAGNGTLNHLLGEMLGSMAGINLQHVPYKGVAPALNDVLGGQLPMLFASLPSALSHIKAGKLRALAVSGA NRSPVLPDVPTIAETVPGYNGTLWIGLFAPAGVPPDVLARLQDGMAKALAAKDLRDKLEQQGVELAGPPERPVTPEQFAA VLNDDIAKWARIVKSSGASVD
Sequences:
>Translated_341_residues MPDGVCHRISVRRFFIAAAATAAAGLLAVGTSALAQSPYPNRPIVMIVPQAAGGTNDIVGRLVSQKLGEVLNTPAVVENR PGAGGNIGTQAAAKAPKDGYTLLMTISSSQAINPALYKNAGFDPVRDFKPVSLIGAVPNVLLVHPSFPAKSVAELAALAN KGKPGQYQYASAGNGTLNHLLGEMLGSMAGINLQHVPYKGVAPALNDVLGGQLPMLFASLPSALSHIKAGKLRALAVSGA NRSPVLPDVPTIAETVPGYNGTLWIGLFAPAGVPPDVLARLQDGMAKALAAKDLRDKLEQQGVELAGPPERPVTPEQFAA VLNDDIAKWARIVKSSGASVD >Mature_340_residues PDGVCHRISVRRFFIAAAATAAAGLLAVGTSALAQSPYPNRPIVMIVPQAAGGTNDIVGRLVSQKLGEVLNTPAVVENRP GAGGNIGTQAAAKAPKDGYTLLMTISSSQAINPALYKNAGFDPVRDFKPVSLIGAVPNVLLVHPSFPAKSVAELAALANK GKPGQYQYASAGNGTLNHLLGEMLGSMAGINLQHVPYKGVAPALNDVLGGQLPMLFASLPSALSHIKAGKLRALAVSGAN RSPVLPDVPTIAETVPGYNGTLWIGLFAPAGVPPDVLARLQDGMAKALAAKDLRDKLEQQGVELAGPPERPVTPEQFAAV LNDDIAKWARIVKSSGASVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35126; Mature: 34995
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGVCHRISVRRFFIAAAATAAAGLLAVGTSALAQSPYPNRPIVMIVPQAAGGTNDIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH RLVSQKLGEVLNTPAVVENRPGAGGNIGTQAAAKAPKDGYTLLMTISSSQAINPALYKNA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHCCC GFDPVRDFKPVSLIGAVPNVLLVHPSFPAKSVAELAALANKGKPGQYQYASAGNGTLNHL CCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHH LGEMLGSMAGINLQHVPYKGVAPALNDVLGGQLPMLFASLPSALSHIKAGKLRALAVSGA HHHHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC NRSPVLPDVPTIAETVPGYNGTLWIGLFAPAGVPPDVLARLQDGMAKALAAKDLRDKLEQ CCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QGVELAGPPERPVTPEQFAAVLNDDIAKWARIVKSSGASVD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PDGVCHRISVRRFFIAAAATAAAGLLAVGTSALAQSPYPNRPIVMIVPQAAGGTNDIVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH RLVSQKLGEVLNTPAVVENRPGAGGNIGTQAAAKAPKDGYTLLMTISSSQAINPALYKNA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHCCC GFDPVRDFKPVSLIGAVPNVLLVHPSFPAKSVAELAALANKGKPGQYQYASAGNGTLNHL CCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHH LGEMLGSMAGINLQHVPYKGVAPALNDVLGGQLPMLFASLPSALSHIKAGKLRALAVSGA HHHHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC NRSPVLPDVPTIAETVPGYNGTLWIGLFAPAGVPPDVLARLQDGMAKALAAKDLRDKLEQ CCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QGVELAGPPERPVTPEQFAAVLNDDIAKWARIVKSSGASVD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]