| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786485
Identifier: 91786485
GI number: 91786485
Start: 582701
End: 583693
Strand: Reverse
Name: 91786485
Synonym: Bpro_0579
Alternate gene names: NA
Gene position: 583693-582701 (Counterclockwise)
Preceding gene: 91786486
Following gene: 91786484
Centisome position: 11.22
GC content: 63.65
Gene sequence:
>993_bases ATGATCAAACTCAACACCGTCAAAACCGCGCTGGCGGCTTGTACGGCAGCGCTCGCGCTGTCGGCCAGCCTGCCGGCTTT CAGCCAGGCCTTCCCCGACAAACCCGTCACCCTGGTGGTGCCGTTCGCTGCCGGCGGCCCCACCGACGTGCTGGCCCGCA TGATCGCCATTCCCATGGGCAAGTCCCTGGGCCAGACGGTGATCGTTGAAAACACCGTCGGCGCCGGCGGCACGATTGCG GCCACCCGGGTGGCGCGATCCACCCCCAATGGCTACACCCTCTTTATTCACCACATGGGCATGGCCACCGCGCCGGCGCT GTACAAAAAGCTCAGCTTCGATCCGCTGAAAGACTTCGAGTACATCGGCCAGGTGGTGGATGTGCCGATGACGCTGCTGG CGCGCAAGGACTTTCCCGCCAACAACTTCAATGAGCTGCTGGCCTACGTCAAGACCAACAAGGAAAAGGTGTCGCTGGCC AATGCCGGGCTGGGCGCCGTGTCGCACCTGTGCGGCCTGCTGTTCATGAGCCAGATCGGCGTGGAGCTCAACACCATTCC CTACAAGGGTACCGGCCCCGCCATCAATGACCTGCTGGGCGGCCAGGTGGACCTGCTGTGCGACCAGACCACGCAAACCG TGCCGATGATCAAGGATGGCCGCGTCAAGGTGTTCGGCGTGACCTCGCTCAAGCGCCTGTCGGCTTTGCCCAATGTGCCC ACGCTGGACGAGCAGGGTCTCAAGGGCTTTGAGGTCAAGGTGTGGCACGGCATCTACGCACCCAAGGGCACGCCGGCACC GGTGCTCGACAAGATCAACGCCTCTCTGCGCGCGGCCATGCAGGATCCGACGGTCAAGCAGCGCCTGGCCGAACTGAGCT CGGACATCGTGCCGCTGGACAAGATGACCCCGGCCGCCCTGAAGAGCCACCTGGAGGCCGAGATCAACAAATGGAGCCCG GTGATCAAGAAGGCTGGCGTGTACGCCGATTGA
Upstream 100 bases:
>100_bases CCTCAGCGCCCAAGATGAGATCACAGGGTGGCAGCGCCCCGCTCTCGCCGGCCGGCCCGGCAGCAACCATTTACAGCATT TACAGCAAGGAAGACACATC
Downstream 100 bases:
>100_bases ACCGGATTTGAGCCCGACTGCATCCCGCCTGGCCATCATCATGGCCCGGTGGTGCAATTGGGCATGAATCTGGCCCGCAG CCAAGCTGGATGGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIKLNTVKTALAACTAALALSASLPAFSQAFPDKPVTLVVPFAAGGPTDVLARMIAIPMGKSLGQTVIVENTVGAGGTIA ATRVARSTPNGYTLFIHHMGMATAPALYKKLSFDPLKDFEYIGQVVDVPMTLLARKDFPANNFNELLAYVKTNKEKVSLA NAGLGAVSHLCGLLFMSQIGVELNTIPYKGTGPAINDLLGGQVDLLCDQTTQTVPMIKDGRVKVFGVTSLKRLSALPNVP TLDEQGLKGFEVKVWHGIYAPKGTPAPVLDKINASLRAAMQDPTVKQRLAELSSDIVPLDKMTPAALKSHLEAEINKWSP VIKKAGVYAD
Sequences:
>Translated_330_residues MIKLNTVKTALAACTAALALSASLPAFSQAFPDKPVTLVVPFAAGGPTDVLARMIAIPMGKSLGQTVIVENTVGAGGTIA ATRVARSTPNGYTLFIHHMGMATAPALYKKLSFDPLKDFEYIGQVVDVPMTLLARKDFPANNFNELLAYVKTNKEKVSLA NAGLGAVSHLCGLLFMSQIGVELNTIPYKGTGPAINDLLGGQVDLLCDQTTQTVPMIKDGRVKVFGVTSLKRLSALPNVP TLDEQGLKGFEVKVWHGIYAPKGTPAPVLDKINASLRAAMQDPTVKQRLAELSSDIVPLDKMTPAALKSHLEAEINKWSP VIKKAGVYAD >Mature_330_residues MIKLNTVKTALAACTAALALSASLPAFSQAFPDKPVTLVVPFAAGGPTDVLARMIAIPMGKSLGQTVIVENTVGAGGTIA ATRVARSTPNGYTLFIHHMGMATAPALYKKLSFDPLKDFEYIGQVVDVPMTLLARKDFPANNFNELLAYVKTNKEKVSLA NAGLGAVSHLCGLLFMSQIGVELNTIPYKGTGPAINDLLGGQVDLLCDQTTQTVPMIKDGRVKVFGVTSLKRLSALPNVP TLDEQGLKGFEVKVWHGIYAPKGTPAPVLDKINASLRAAMQDPTVKQRLAELSSDIVPLDKMTPAALKSHLEAEINKWSP VIKKAGVYAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35047; Mature: 35047
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLNTVKTALAACTAALALSASLPAFSQAFPDKPVTLVVPFAAGGPTDVLARMIAIPMG CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCC KSLGQTVIVENTVGAGGTIAATRVARSTPNGYTLFIHHMGMATAPALYKKLSFDPLKDFE CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHH YIGQVVDVPMTLLARKDFPANNFNELLAYVKTNKEKVSLANAGLGAVSHLCGLLFMSQIG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHHHHC VELNTIPYKGTGPAINDLLGGQVDLLCDQTTQTVPMIKDGRVKVFGVTSLKRLSALPNVP CEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEECCCEEEEECHHHHHHHCCCCCC TLDEQGLKGFEVKVWHGIYAPKGTPAPVLDKINASLRAAMQDPTVKQRLAELSSDIVPLD CCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC KMTPAALKSHLEAEINKWSPVIKKAGVYAD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKLNTVKTALAACTAALALSASLPAFSQAFPDKPVTLVVPFAAGGPTDVLARMIAIPMG CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCC KSLGQTVIVENTVGAGGTIAATRVARSTPNGYTLFIHHMGMATAPALYKKLSFDPLKDFE CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHH YIGQVVDVPMTLLARKDFPANNFNELLAYVKTNKEKVSLANAGLGAVSHLCGLLFMSQIG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHHHHC VELNTIPYKGTGPAINDLLGGQVDLLCDQTTQTVPMIKDGRVKVFGVTSLKRLSALPNVP CEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEECCCEEEEECHHHHHHHCCCCCC TLDEQGLKGFEVKVWHGIYAPKGTPAPVLDKINASLRAAMQDPTVKQRLAELSSDIVPLD CCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC KMTPAALKSHLEAEINKWSPVIKKAGVYAD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]