Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786424

Identifier: 91786424

GI number: 91786424

Start: 521288

End: 521824

Strand: Reverse

Name: 91786424

Synonym: Bpro_0515

Alternate gene names: NA

Gene position: 521824-521288 (Counterclockwise)

Preceding gene: 91786425

Following gene: 91786423

Centisome position: 10.03

GC content: 56.61

Gene sequence:

>537_bases
ATGACCACCATCAACGTTCCCACCCGCGAAAAAGTGTCCCCCGCCAACCAAGCCATTTTTGACAACCTCAAAAAAGCTCT
CGGCATGGTGCCAAATCTCTACGCCACCTTTGCCCACTCCGAGACCGCGCTGGCCAGCTATATGGCGTTCCAAAACGCCA
AGAGCAGCGTATCGGGCAAAGCTCGCGAGGTGGTAAACCTCGTGGTGAGCCAGGTCAACGAATGCGAGTACTGCTTGGCC
GCGCACACCATGCTCGGCAAGATGAACGGCTTCACCGATGAGCAGATCCTCGAAATCCGCCATGGCCATGCCAGCTTCGA
CGGCAAGTTCGACGCGCTTGCGCGCTTGACCAAAGGCATCACCCAAAACCGTGGCCACGTCGACCAAACCCTTGTCACTG
CGTTCTTTGCTGCTGGCTGGACGAAGGAAAACCTGGTCGATGCCATTGTGATCATTGGCGACAAAACCGTGAGCAACTAT
TTGCACTCGACGACCCAAGTCCCGGTGGATTTTCCTGCCGCCCCCAAGCTCGACTAA

Upstream 100 bases:

>100_bases
CACCGGCCAGTCCATCGCTGTGGATGGCGGTTTCACCATTCAATAAACCCGATTCTCAAGTTTCACTTCACTGTTTTTAT
CAAACCAATAGGAAATCATC

Downstream 100 bases:

>100_bases
TCGGCCCACCACTGGAGCGCACCATGCAAAATACCTTACTGCCCCATTCGCCTACATCGCCAACTGGTGAAACGGCAAAA
CTTGCAGCGGGGATTGCCGT

Product: alkylhydroperoxidase AhpD

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase AhpD Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Macrophage Infectivity Potentiator-Related Protein; Peroxidase; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Macrophage Infectivity Potentiator Protein; Alkylhydroperoxidase-Like Protein; Mip Protein; Ypothetical Protein SMU.; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Antioxydant Protein; Alkylhydroperoxidase AhpD Family Protein; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTTINVPTREKVSPANQAIFDNLKKALGMVPNLYATFAHSETALASYMAFQNAKSSVSGKAREVVNLVVSQVNECEYCLA
AHTMLGKMNGFTDEQILEIRHGHASFDGKFDALARLTKGITQNRGHVDQTLVTAFFAAGWTKENLVDAIVIIGDKTVSNY
LHSTTQVPVDFPAAPKLD

Sequences:

>Translated_178_residues
MTTINVPTREKVSPANQAIFDNLKKALGMVPNLYATFAHSETALASYMAFQNAKSSVSGKAREVVNLVVSQVNECEYCLA
AHTMLGKMNGFTDEQILEIRHGHASFDGKFDALARLTKGITQNRGHVDQTLVTAFFAAGWTKENLVDAIVIIGDKTVSNY
LHSTTQVPVDFPAAPKLD
>Mature_177_residues
TTINVPTREKVSPANQAIFDNLKKALGMVPNLYATFAHSETALASYMAFQNAKSSVSGKAREVVNLVVSQVNECEYCLAA
HTMLGKMNGFTDEQILEIRHGHASFDGKFDALARLTKGITQNRGHVDQTLVTAFFAAGWTKENLVDAIVIIGDKTVSNYL
HSTTQVPVDFPAAPKLD

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19387; Mature: 19256

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTINVPTREKVSPANQAIFDNLKKALGMVPNLYATFAHSETALASYMAFQNAKSSVSGK
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
AREVVNLVVSQVNECEYCLAAHTMLGKMNGFTDEQILEIRHGHASFDGKFDALARLTKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TQNRGHVDQTLVTAFFAAGWTKENLVDAIVIIGDKTVSNYLHSTTQVPVDFPAAPKLD
HCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTINVPTREKVSPANQAIFDNLKKALGMVPNLYATFAHSETALASYMAFQNAKSSVSGK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
AREVVNLVVSQVNECEYCLAAHTMLGKMNGFTDEQILEIRHGHASFDGKFDALARLTKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TQNRGHVDQTLVTAFFAAGWTKENLVDAIVIIGDKTVSNYLHSTTQVPVDFPAAPKLD
HCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA