| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786422
Identifier: 91786422
GI number: 91786422
Start: 520326
End: 520832
Strand: Reverse
Name: 91786422
Synonym: Bpro_0513
Alternate gene names: NA
Gene position: 520832-520326 (Counterclockwise)
Preceding gene: 91786423
Following gene: 91786419
Centisome position: 10.02
GC content: 57.99
Gene sequence:
>507_bases TTGGGCATCGCTGTTGTCCTGCTCGGTCTCGTGTTGGTGTCAGGGATCGACACAGCAACTTTCACAAGTCGGTCGCTGTT GGGAGATGCCATGTTCATCGCGGCAGGAACTTTGTGGGCAGGCTTTGGCGTGCTGCTTAGAAAGCATCGGCTTGACACTT TGCTCGCCACATCGGTCATCGCATTTTCAGCACTTGTGACCCATGTTCCGTGTTACTTCTGGGTAACTGGGGCAAAGGGC CTTCTCGCAACAAGCAGTGAGGTGTTTTGGACAGAAGCGCTGATTCAGGGGCTCCCTGCCGGGACCGGCACACTGTTCAC CTACGCCAAGATGGTTTCCATCCTGGGGCCAGCGCGTGCGGCTGTGTTTCCCGCCTTGGCGCCCGGTCTCGCAGCGCTGA TGGCTTGGCCCATTCTGGGGCATACCCCAGGAACCTTCGAAGTCATTGGGCTGCTGATAGTCATGGCTGGGCTGCTCTTT GCAGTCACTGGCGCAAGCAAGCGCTAG
Upstream 100 bases:
>100_bases ATCCAGCCACGCCGCCGTATTCCCCTTCTCAGCCATGAGCGTGATGGGTATGTTGATTGGCGCTTGGGTTCTGCAAGACC GCATCACGCGCTGAAGGGCT
Downstream 100 bases:
>100_bases TTCAACCAATTTCTACTTCATTCAACAACCAGGCAATCAACATGCAAACCGAAACATCACTCTCCACCAAACTCGCAGCC TACAAAGCGGGTTTCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MGIAVVLLGLVLVSGIDTATFTSRSLLGDAMFIAAGTLWAGFGVLLRKHRLDTLLATSVIAFSALVTHVPCYFWVTGAKG LLATSSEVFWTEALIQGLPAGTGTLFTYAKMVSILGPARAAVFPALAPGLAALMAWPILGHTPGTFEVIGLLIVMAGLLF AVTGASKR
Sequences:
>Translated_168_residues MGIAVVLLGLVLVSGIDTATFTSRSLLGDAMFIAAGTLWAGFGVLLRKHRLDTLLATSVIAFSALVTHVPCYFWVTGAKG LLATSSEVFWTEALIQGLPAGTGTLFTYAKMVSILGPARAAVFPALAPGLAALMAWPILGHTPGTFEVIGLLIVMAGLLF AVTGASKR >Mature_167_residues GIAVVLLGLVLVSGIDTATFTSRSLLGDAMFIAAGTLWAGFGVLLRKHRLDTLLATSVIAFSALVTHVPCYFWVTGAKGL LATSSEVFWTEALIQGLPAGTGTLFTYAKMVSILGPARAAVFPALAPGLAALMAWPILGHTPGTFEVIGLLIVMAGLLFA VTGASKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17389; Mature: 17258
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAVVLLGLVLVSGIDTATFTSRSLLGDAMFIAAGTLWAGFGVLLRKHRLDTLLATSVI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSALVTHVPCYFWVTGAKGLLATSSEVFWTEALIQGLPAGTGTLFTYAKMVSILGPARA HHHHHHHHCCHHEEEECCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHH AVFPALAPGLAALMAWPILGHTPGTFEVIGLLIVMAGLLFAVTGASKR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GIAVVLLGLVLVSGIDTATFTSRSLLGDAMFIAAGTLWAGFGVLLRKHRLDTLLATSVI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSALVTHVPCYFWVTGAKGLLATSSEVFWTEALIQGLPAGTGTLFTYAKMVSILGPARA HHHHHHHHCCHHEEEECCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHH AVFPALAPGLAALMAWPILGHTPGTFEVIGLLIVMAGLLFAVTGASKR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA