| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786308
Identifier: 91786308
GI number: 91786308
Start: 410442
End: 410993
Strand: Reverse
Name: 91786308
Synonym: Bpro_0398
Alternate gene names: NA
Gene position: 410993-410442 (Counterclockwise)
Preceding gene: 91786309
Following gene: 91786306
Centisome position: 7.9
GC content: 59.6
Gene sequence:
>552_bases ATGAAATTCAACCCCGCATTTCTGGCCACGATCGCACTGGCCATGACCATAGCCACCGGCGCCGCCGCGCAAACCATGAA ACCGGGTTTGTGGGAGATCCACAACAAGATGCAATCGGGCTCGGGCTCGGGCGAGATGGAACAGGCCATGGCCAACATGG ACAAGCAGATGGCCGGCATGCCGCCCGAACAGCGCAAGCAAATGCAGGACATGCTGGCCAAACAGGGCATGGGTCAAGGT GGTGCCGGCGGCATGAGCATGAAGATTTGCATGACCAGGGAAATGGTCGAGCGCAACGAAATGCCGTCACAGCAGCAGGG CGACTGCAAGACCACCCACTCGCCGCGCAGTGGCAACACGATGAAGTTTTCCTATACCTGCGCCCAGCCGCCGTCCAGCG GCGAAGGCCAGATCACCTACGTGAGTGACACCGCCTACACGATGAAGATGGCGACCACCGCCACGGTCAGGGGCAAGGCC GAGAAGATGAACATGGACGCTTCGGGAAAATGGCTGTCGGCGGACTGCGGCAATATCAAGCCCAAGAAATAG
Upstream 100 bases:
>100_bases GTGAAGGTGACGGCGAGGGGTTGCAAACCGGTGCATGGTGGCAATAATGCGGGATCATGCGAGATCGCCCTCCAAACTTG TCTTTTCAACAAGGATGCCC
Downstream 100 bases:
>100_bases CCCCCACGGTCGCTCACTGCGTGTAGCTCCCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGCCCGGCAAAGCCGGTTCCG CGGCCCCTGCTGGATTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKFNPAFLATIALAMTIATGAAAQTMKPGLWEIHNKMQSGSGSGEMEQAMANMDKQMAGMPPEQRKQMQDMLAKQGMGQG GAGGMSMKICMTREMVERNEMPSQQQGDCKTTHSPRSGNTMKFSYTCAQPPSSGEGQITYVSDTAYTMKMATTATVRGKA EKMNMDASGKWLSADCGNIKPKK
Sequences:
>Translated_183_residues MKFNPAFLATIALAMTIATGAAAQTMKPGLWEIHNKMQSGSGSGEMEQAMANMDKQMAGMPPEQRKQMQDMLAKQGMGQG GAGGMSMKICMTREMVERNEMPSQQQGDCKTTHSPRSGNTMKFSYTCAQPPSSGEGQITYVSDTAYTMKMATTATVRGKA EKMNMDASGKWLSADCGNIKPKK >Mature_183_residues MKFNPAFLATIALAMTIATGAAAQTMKPGLWEIHNKMQSGSGSGEMEQAMANMDKQMAGMPPEQRKQMQDMLAKQGMGQG GAGGMSMKICMTREMVERNEMPSQQQGDCKTTHSPRSGNTMKFSYTCAQPPSSGEGQITYVSDTAYTMKMATTATVRGKA EKMNMDASGKWLSADCGNIKPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022061 [H]
Pfam domain/function: PF12276 DUF3617 [H]
EC number: NA
Molecular weight: Translated: 19742; Mature: 19742
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 12.0 %Met (Translated Protein) 14.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 12.0 %Met (Mature Protein) 14.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNPAFLATIALAMTIATGAAAQTMKPGLWEIHNKMQSGSGSGEMEQAMANMDKQMAGM CCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PPEQRKQMQDMLAKQGMGQGGAGGMSMKICMTREMVERNEMPSQQQGDCKTTHSPRSGNT CHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE MKFSYTCAQPPSSGEGQITYVSDTAYTMKMATTATVRGKAEKMNMDASGKWLSADCGNIK EEEEEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCHHHCCCCCCCCEEECCCCCCC PKK CCC >Mature Secondary Structure MKFNPAFLATIALAMTIATGAAAQTMKPGLWEIHNKMQSGSGSGEMEQAMANMDKQMAGM CCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PPEQRKQMQDMLAKQGMGQGGAGGMSMKICMTREMVERNEMPSQQQGDCKTTHSPRSGNT CHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE MKFSYTCAQPPSSGEGQITYVSDTAYTMKMATTATVRGKAEKMNMDASGKWLSADCGNIK EEEEEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCHHHCCCCCCCCEEECCCCCCC PKK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA