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The map label for this gene is yggS [C]

Identifier: 91786307

GI number: 91786307

Start: 409562

End: 410278

Strand: Direct

Name: yggS [C]

Synonym: Bpro_0397

Alternate gene names: 91786307

Gene position: 409562-410278 (Clockwise)

Preceding gene: 91786303

Following gene: 91786311

Centisome position: 7.88

GC content: 64.85

Gene sequence:

>717_bases
ATGACCATGATTGTGCGCAACCTCCAGCTTGTCCGTGACCGGATTACCACGGCGTGTGTGGCCGCGGGGCGCGATCCGGC
CAGCGTGCGCCTGCTGGCGGTTTCCAAAACATTTGGCGCCGATGCCGTGATCGACGCCATGTCGGACGGGCAGCGCGCGT
TTGGAGAAAACTACGTTGCCGAGGGCGTGGAGAAAATTCTGGCGCTGCGCGCCTGGCAAGCGGCGCAGGCCGGCGCGCCT
GCCGTGCTGGAGTGGCACTGCATCGGGCCGGTGCAAAGCAACAAGACCCGCCTGGTGGCCGAGCACTTCGATTGGGTTCA
GTCGGTCGACCGGCTGAAGACCGCGCAACGCCTCAGCGAGCAGCGACCGCCTCACCTGCCGCCCCTGCAGATCTGTTTGC
AGGTGAATGTGGATGGCGGCGCGAACAAGTCGGGCGCGGCACCCGAAGAGGCGCTGGCGCTGGCGCAAGAAATTGCGCAG
CTGCCGCGGCTGACGCTGCGTGGGCTCATGGCGATTCCCGAGCCTGCTATTGATTTTGTAGCTGCCTGCGCCGTTCACGC
CAGGACGAGAGCCATTTTTGACCAGATAAACGCGGCGGGCGTGTTGCCTGCACCCATGGACACGCTGTCGATGGGCATGA
CGGCCGACCTGGAGGCCGCCATCCATTCCGGCAGCACCATGGTTCGCGTGGGCACCGCGATCTTCGGAAAGAGATGA

Upstream 100 bases:

>100_bases
TCGGACGCCTTGTTTTTGACGCTAAAGGCCAGCAGCTGCGTGATGTCCATCCCGGGGGATCCTTGGAAGTCGAGGTTGAA
TCTGAGTTTACAGTTCGATT

Downstream 100 bases:

>100_bases
GCCCCTGTTCCGCCAGATGGCACTGCCCTTCGATACCTCGGGGCGACCGGAAGCTGCGTGAGGCTCTAATCCAGCAGGGG
CCGCGGAACCGGCTTTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTMIVRNLQLVRDRITTACVAAGRDPASVRLLAVSKTFGADAVIDAMSDGQRAFGENYVAEGVEKILALRAWQAAQAGAP
AVLEWHCIGPVQSNKTRLVAEHFDWVQSVDRLKTAQRLSEQRPPHLPPLQICLQVNVDGGANKSGAAPEEALALAQEIAQ
LPRLTLRGLMAIPEPAIDFVAACAVHARTRAIFDQINAAGVLPAPMDTLSMGMTADLEAAIHSGSTMVRVGTAIFGKR

Sequences:

>Translated_238_residues
MTMIVRNLQLVRDRITTACVAAGRDPASVRLLAVSKTFGADAVIDAMSDGQRAFGENYVAEGVEKILALRAWQAAQAGAP
AVLEWHCIGPVQSNKTRLVAEHFDWVQSVDRLKTAQRLSEQRPPHLPPLQICLQVNVDGGANKSGAAPEEALALAQEIAQ
LPRLTLRGLMAIPEPAIDFVAACAVHARTRAIFDQINAAGVLPAPMDTLSMGMTADLEAAIHSGSTMVRVGTAIFGKR
>Mature_237_residues
TMIVRNLQLVRDRITTACVAAGRDPASVRLLAVSKTFGADAVIDAMSDGQRAFGENYVAEGVEKILALRAWQAAQAGAPA
VLEWHCIGPVQSNKTRLVAEHFDWVQSVDRLKTAQRLSEQRPPHLPPLQICLQVNVDGGANKSGAAPEEALALAQEIAQL
PRLTLRGLMAIPEPAIDFVAACAVHARTRAIFDQINAAGVLPAPMDTLSMGMTADLEAAIHSGSTMVRVGTAIFGKR

Specific function: Unknown

COG id: COG0325

COG function: function code R; Predicted enzyme with a TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0001 family [H]

Homologues:

Organism=Homo sapiens, GI6005842, Length=252, Percent_Identity=35.3174603174603, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI1789321, Length=238, Percent_Identity=51.2605042016807, Blast_Score=222, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17533025, Length=228, Percent_Identity=35.9649122807018, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6319435, Length=250, Percent_Identity=29.2, Blast_Score=89, Evalue=6e-19,
Organism=Drosophila melanogaster, GI45550861, Length=250, Percent_Identity=38.8, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608
- InterPro:   IPR011078 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: NA

Molecular weight: Translated: 25393; Mature: 25261

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMIVRNLQLVRDRITTACVAAGRDPASVRLLAVSKTFGADAVIDAMSDGQRAFGENYVA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHCCHHHH
EGVEKILALRAWQAAQAGAPAVLEWHCIGPVQSNKTRLVAEHFDWVQSVDRLKTAQRLSE
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QRPPHLPPLQICLQVNVDGGANKSGAAPEEALALAQEIAQLPRLTLRGLMAIPEPAIDFV
CCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AACAVHARTRAIFDQINAAGVLPAPMDTLSMGMTADLEAAIHSGSTMVRVGTAIFGKR
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEEHHHHHCCC
>Mature Secondary Structure 
TMIVRNLQLVRDRITTACVAAGRDPASVRLLAVSKTFGADAVIDAMSDGQRAFGENYVA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHCCHHHH
EGVEKILALRAWQAAQAGAPAVLEWHCIGPVQSNKTRLVAEHFDWVQSVDRLKTAQRLSE
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QRPPHLPPLQICLQVNVDGGANKSGAAPEEALALAQEIAQLPRLTLRGLMAIPEPAIDFV
CCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AACAVHARTRAIFDQINAAGVLPAPMDTLSMGMTADLEAAIHSGSTMVRVGTAIFGKR
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]