| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786277
Identifier: 91786277
GI number: 91786277
Start: 382390
End: 383400
Strand: Reverse
Name: 91786277
Synonym: Bpro_0367
Alternate gene names: NA
Gene position: 383400-382390 (Counterclockwise)
Preceding gene: 91786278
Following gene: 91786276
Centisome position: 7.37
GC content: 62.71
Gene sequence:
>1011_bases ATGACCCAGACCAAATCCCTGTTTCATTCCCAGCGGCCACTGCATCAAAAGCGGGTTGACCGACCCCACCCGTCCGAGCT GTCCCAGCCGTCCCTGCCCATGGGCGTCTGGCTGCCCAGAAGGCCAAGACACCCGGCCAGTGACGGATTCAACCGTCACG CTGCTTCAAACCAGCCAAGCTACGTCTACCTGTTTGTTCACGCCACTGAGAACCGATTCAAGATTGGCAAAAGCAAATCG CCCACAGACCGTTTAGCCCAGCTGCCCGAAGCCGGTCAGATTGACGGGACGCAATCGCTGCGGGTGGCGCTGCCAGATCG CCAGCGTGCCGGCCAGGTCGAATCTCTGCTGCACAAGGGGCTGGCGGGCTATCGCCTGCAGCTGTCCTGGATGAGTGCTT CGGGCATGTTCAAGGTCCAGTCCCAGCCATGGGATGGGGCGACTGAATGGTTCAGCCTGACGGGGCTGCGTCATGCCATC GAATTGCTGCGCGCCGTGCCGGGATTGCATGACGCAGAAGGCGCGCTGCTGCAAACCCTGGACGGCCAGCCTTATTGGCT GGACCGCCTCGACGATCACCGGTCCCTGCAGGATCAGCGCAGGCACGAAGCGGGGCGCTACAACCTGGGCCGCTTGGAGC ATGTCTGCGATGTGCTCATGCAGATCAAGCGCCACCTCGACTTCTGCTGGACCGAAAGCAGTGACCAGAAGGCGAGCGCC GGCACCCTGCGCATCAAGGGTTTCAAGCCGTGGTGGACGATTGAGCATCTGGCTCCCCGCCTGGCGCTCACCAGCCATGA GCTGTGGGCCCTGAAGACCGGCAAGCTCCCCAGCAAGCCGGACGGTGCAATGCAAGCGTTCACGCCGCTGGTCAAACTCA TCCGCTATGCGGGTGATGAACCCAAGGATCTGGAGCTGGTGCTCAACGCCATGGAGCGGATCAGGAAGCTGCCGGCGGGC GCGGTGATCGCCAGGCGCTGGGCCGCGTTTCGGGAGGTCATCACATCATGA
Upstream 100 bases:
>100_bases AAACCACCCCGGATGAATTTACGCGGTCGGATCAGCCCTTGAATCCATCCGATCCGGTCGCTCCCTCCCATCCAGCCAAG CCATAGAACGGAAACCAGCC
Downstream 100 bases:
>100_bases GCCTCTACCCGCTGCCACTTGAAGTGCTGCAAATCAACGCCCAGCTGAAAAAGCCCACACTGGAACCCGCACCTTCTCAA ACAATACTGGCGCTGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTQTKSLFHSQRPLHQKRVDRPHPSELSQPSLPMGVWLPRRPRHPASDGFNRHAASNQPSYVYLFVHATENRFKIGKSKS PTDRLAQLPEAGQIDGTQSLRVALPDRQRAGQVESLLHKGLAGYRLQLSWMSASGMFKVQSQPWDGATEWFSLTGLRHAI ELLRAVPGLHDAEGALLQTLDGQPYWLDRLDDHRSLQDQRRHEAGRYNLGRLEHVCDVLMQIKRHLDFCWTESSDQKASA GTLRIKGFKPWWTIEHLAPRLALTSHELWALKTGKLPSKPDGAMQAFTPLVKLIRYAGDEPKDLELVLNAMERIRKLPAG AVIARRWAAFREVITS
Sequences:
>Translated_336_residues MTQTKSLFHSQRPLHQKRVDRPHPSELSQPSLPMGVWLPRRPRHPASDGFNRHAASNQPSYVYLFVHATENRFKIGKSKS PTDRLAQLPEAGQIDGTQSLRVALPDRQRAGQVESLLHKGLAGYRLQLSWMSASGMFKVQSQPWDGATEWFSLTGLRHAI ELLRAVPGLHDAEGALLQTLDGQPYWLDRLDDHRSLQDQRRHEAGRYNLGRLEHVCDVLMQIKRHLDFCWTESSDQKASA GTLRIKGFKPWWTIEHLAPRLALTSHELWALKTGKLPSKPDGAMQAFTPLVKLIRYAGDEPKDLELVLNAMERIRKLPAG AVIARRWAAFREVITS >Mature_335_residues TQTKSLFHSQRPLHQKRVDRPHPSELSQPSLPMGVWLPRRPRHPASDGFNRHAASNQPSYVYLFVHATENRFKIGKSKSP TDRLAQLPEAGQIDGTQSLRVALPDRQRAGQVESLLHKGLAGYRLQLSWMSASGMFKVQSQPWDGATEWFSLTGLRHAIE LLRAVPGLHDAEGALLQTLDGQPYWLDRLDDHRSLQDQRRHEAGRYNLGRLEHVCDVLMQIKRHLDFCWTESSDQKASAG TLRIKGFKPWWTIEHLAPRLALTSHELWALKTGKLPSKPDGAMQAFTPLVKLIRYAGDEPKDLELVLNAMERIRKLPAGA VIARRWAAFREVITS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38164; Mature: 38033
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTKSLFHSQRPLHQKRVDRPHPSELSQPSLPMGVWLPRRPRHPASDGFNRHAASNQPS CCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YVYLFVHATENRFKIGKSKSPTDRLAQLPEAGQIDGTQSLRVALPDRQRAGQVESLLHKG EEEEEEEECCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHHHHHCC LAGYRLQLSWMSASGMFKVQSQPWDGATEWFSLTGLRHAIELLRAVPGLHDAEGALLQTL CCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC DGQPYWLDRLDDHRSLQDQRRHEAGRYNLGRLEHVCDVLMQIKRHLDFCWTESSDQKASA CCCCEEHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTLRIKGFKPWWTIEHLAPRLALTSHELWALKTGKLPSKPDGAMQAFTPLVKLIRYAGDE CEEEEECCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC PKDLELVLNAMERIRKLPAGAVIARRWAAFREVITS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQTKSLFHSQRPLHQKRVDRPHPSELSQPSLPMGVWLPRRPRHPASDGFNRHAASNQPS CCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YVYLFVHATENRFKIGKSKSPTDRLAQLPEAGQIDGTQSLRVALPDRQRAGQVESLLHKG EEEEEEEECCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHHHHHCC LAGYRLQLSWMSASGMFKVQSQPWDGATEWFSLTGLRHAIELLRAVPGLHDAEGALLQTL CCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC DGQPYWLDRLDDHRSLQDQRRHEAGRYNLGRLEHVCDVLMQIKRHLDFCWTESSDQKASA CCCCEEHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTLRIKGFKPWWTIEHLAPRLALTSHELWALKTGKLPSKPDGAMQAFTPLVKLIRYAGDE CEEEEECCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC PKDLELVLNAMERIRKLPAGAVIARRWAAFREVITS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA