BacMap

Definition	Polaromonas sp. JS666 chromosome, complete genome.
Accession	NC_007948
Length	5,200,264

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The map label for this gene is fabG [H]

Identifier: 91786256

GI number: 91786256

Start: 366248

End: 366976

Strand: Direct

Name: fabG [H]

Synonym: Bpro_0346

Alternate gene names: 91786256

Gene position: 366248-366976 (Clockwise)

Preceding gene: 91786255

Following gene: 91786257

Centisome position: 7.04

GC content: 54.18

Gene sequence:

>729_bases
ATGACTAAGGGAATTGATCGCGTTGCTCTTGTTACAGGTGGCTCTGGCGGGATTGGTAGGGCGGTGGCCGAAAAGTTGGC
CAGCCAAGGTGTCGCCGTTGGGATTGCCTACGGCAACAGCGAAACCAAAGCTGCGGAAACCGTTGAAAAAATCATTGCCG
AAGGTGGCCGTGCATTTGCCATCAAGGGGGATGTAACGCATGCAGCGGACGTCAAACGTCTATTTGACGAGACGGAAAAG
AAATTTGGAAAGATAAGCGTCGTCGTCAGTGTTACCGGTTCGTTCCTTATGAGGCCATTTGCAGAAGCTTCGGAAGCAGA
TTACGACACCGGAATGACCGTCAACGCGAAGGGCACGTATTTGGTTTATTCGGAAGCGGCTCGACGAGTTGTAGACGGCG
GACGGATCATTGGCATATCGTCGAATCTGGTTTTATCGGGCCGGCCAGGCCTCGGATTGTACGTGGCCGGCAAAGCTGCA
GTGGAGCAGTTTTCGAAGATTCTCGCAAAGGAGCTGGGATCGCGGCAAATCACTGTTAACGCCGTCGCTCCAGGTCCAAC
GGATACCGAGATGCTTTCTGAAGCTGGTAGGAAAAGTGCGCCGACCATCACTCCGTTGGGTCGAATCGCGCAGCCGATCG
AAATTGCAAACGTTGTCGCATTCCTCGCCTCGCCCGAGGGCGGATGGGTGAATGGTCAAGTTGTCGGCGTCAACGGCGGC
ATCATTTAA

Upstream 100 bases:

>100_bases
CTCACACCTCGTTGGATAAGACTTGTCGTTGACAGGACCGAATGAAAGAACTACCATTGAGTTTATGCAAACGTTTGCAT
GATTCAATTAAGGTGTTGAT

Downstream 100 bases:

>100_bases
CGCCTAACTACAGTGAGCACGCGGTTACGACTATGCAGAACACCCTCAGCACCGTTGACTTGGTCATACTTGCAACTAGG
CTCACCTACGGCGCCTCGAG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTKGIDRVALVTGGSGGIGRAVAEKLASQGVAVGIAYGNSETKAAETVEKIIAEGGRAFAIKGDVTHAADVKRLFDETEK
KFGKISVVVSVTGSFLMRPFAEASEADYDTGMTVNAKGTYLVYSEAARRVVDGGRIIGISSNLVLSGRPGLGLYVAGKAA
VEQFSKILAKELGSRQITVNAVAPGPTDTEMLSEAGRKSAPTITPLGRIAQPIEIANVVAFLASPEGGWVNGQVVGVNGG
II

Sequences:

>Translated_242_residues
MTKGIDRVALVTGGSGGIGRAVAEKLASQGVAVGIAYGNSETKAAETVEKIIAEGGRAFAIKGDVTHAADVKRLFDETEK
KFGKISVVVSVTGSFLMRPFAEASEADYDTGMTVNAKGTYLVYSEAARRVVDGGRIIGISSNLVLSGRPGLGLYVAGKAA
VEQFSKILAKELGSRQITVNAVAPGPTDTEMLSEAGRKSAPTITPLGRIAQPIEIANVVAFLASPEGGWVNGQVVGVNGG
II
>Mature_241_residues
TKGIDRVALVTGGSGGIGRAVAEKLASQGVAVGIAYGNSETKAAETVEKIIAEGGRAFAIKGDVTHAADVKRLFDETEKK
FGKISVVVSVTGSFLMRPFAEASEADYDTGMTVNAKGTYLVYSEAARRVVDGGRIIGISSNLVLSGRPGLGLYVAGKAAV
EQFSKILAKELGSRQITVNAVAPGPTDTEMLSEAGRKSAPTITPLGRIAQPIEIANVVAFLASPEGGWVNGQVVGVNGGI
I

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=33.7448559670782, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=36.9477911646586, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=32.5301204819277, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=29.7619047619048, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=30.5555555555556, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=29.7619047619048, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=26.2948207171315, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI59889578, Length=206, Percent_Identity=33.0097087378641, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=30.0411522633745, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4503301, Length=225, Percent_Identity=28.4444444444444, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=28.740157480315, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4504505, Length=249, Percent_Identity=30.9236947791165, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=30.1020408163265, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1789378, Length=242, Percent_Identity=35.9504132231405, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=35.655737704918, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=32.0987654320988, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=30.7377049180328, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=32.0833333333333, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=30.7377049180328, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=31.4285714285714, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=31.7796610169492, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=28.90625, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=28.4552845528455, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786812, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787526, Length=223, Percent_Identity=28.2511210762332, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=27.7992277992278, Blast_Score=67, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=248, Percent_Identity=33.4677419354839, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=31.4741035856574, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=34.1463414634146, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=30.6451612903226, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=31.7460317460317, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17561272, Length=240, Percent_Identity=30.8333333333333, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=31.2741312741313, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=29.0697674418605, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=31.5384615384615, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=29.6, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=32.6446280991736, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=30.7377049180328, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=29.7709923664122, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=27.4131274131274, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=27.6679841897233, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=30.0380228136882, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=29.4776119402985, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=27.6679841897233, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=29.1044776119403, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=28.0155642023346, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=26.7441860465116, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=230, Percent_Identity=30, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=25.7028112449799, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=244, Percent_Identity=29.9180327868852, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322226, Length=192, Percent_Identity=30.2083333333333, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=37.0967741935484, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=31.8725099601594, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=32.1138211382114, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=31.8181818181818, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=28.9795918367347, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644337, Length=204, Percent_Identity=28.4313725490196, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007234, Length=223, Percent_Identity=33.6322869955157, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641232, Length=213, Percent_Identity=29.1079812206573, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24878; Mature: 24747

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGIDRVALVTGGSGGIGRAVAEKLASQGVAVGIAYGNSETKAAETVEKIIAEGGRAFA
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
IKGDVTHAADVKRLFDETEKKFGKISVVVSVTGSFLMRPFAEASEADYDTGMTVNAKGTY
EECCCCHHHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCE
LVYSEAARRVVDGGRIIGISSNLVLSGRPGLGLYVAGKAAVEQFSKILAKELGSRQITVN
EEEHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEE
AVAPGPTDTEMLSEAGRKSAPTITPLGRIAQPIEIANVVAFLASPEGGWVNGQVVGVNGG
EECCCCCCHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHEECCCCCEECCEEEEECCC
II
CC
>Mature Secondary Structure 
TKGIDRVALVTGGSGGIGRAVAEKLASQGVAVGIAYGNSETKAAETVEKIIAEGGRAFA
CCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
IKGDVTHAADVKRLFDETEKKFGKISVVVSVTGSFLMRPFAEASEADYDTGMTVNAKGTY
EECCCCHHHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCE
LVYSEAARRVVDGGRIIGISSNLVLSGRPGLGLYVAGKAAVEQFSKILAKELGSRQITVN
EEEHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEE
AVAPGPTDTEMLSEAGRKSAPTITPLGRIAQPIEIANVVAFLASPEGGWVNGQVVGVNGG
EECCCCCCHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHEECCCCCEECCEEEEECCC
II
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]