The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is lemA [H]

Identifier: 91786242

GI number: 91786242

Start: 353005

End: 353610

Strand: Reverse

Name: lemA [H]

Synonym: Bpro_0331

Alternate gene names: 91786242

Gene position: 353610-353005 (Counterclockwise)

Preceding gene: 91786247

Following gene: 91786241

Centisome position: 6.8

GC content: 60.23

Gene sequence:

>606_bases
ATGAAATCCCGTAGTTTTAGTTTTGCCGGCTGGATGATGGCGGCCGCGCTGAGCGCGCTGCTCACCGGTTGCGGCTACAA
CGACTTTCAGCGCCTGGACGAGCAGACCAAATCCGCCTGGTCCGAGGTGCTGAACCAGTACCAGCGCCGCGCTGACCTGG
TCCCCAACATTGTCGCCACTGTCAAGGGCGAGGCCGCTTTCGAGCAGGACACGTTGACCAAGGTCATAGAGGCGCGCGCC
AAGGCCACATCCATCCAGGTCACGCCCGAAACCCTGAACGACCCGGCCGCCTTCAACAAATTCCAGCAGGCCCAGGGCGA
ACTCGGCAGCGCGCTCAGCCGGCTGATGGTGGTCAGCGAGCGCTATCCCGAACTCAAGGCCAACCAGGGTTTTCGTGACT
TGCGGGTACAGCTGGAAGGCACCGAAAACCGCATCACGGTGGCGCGCAATCGCTACATCCAGGCGGTGCAGGAGTACAAC
GTGCTGACACGCAGCTTCCCCAGCAACCTGACGGCCATGGTGTTCAGCTACAGCGTCAAACCCAACTTCAATGTGCAGAA
CGAGGCACAGATCTCCACACCGCCTGTCGTTGACTTCAAGAAATAA

Upstream 100 bases:

>100_bases
CTGCAGCGGATTGCCCACCGGCAAGGTGCTGCGAGGTGCGGAAGGAGTGGACGACATTCGACTATGTTAGTGTTGCGGCT
TGTATTTTGGAGGCCCTTCC

Downstream 100 bases:

>100_bases
GCGTTACCCTGGGATTGACCGTGCGTCGTTTTGCGGGTTTTCCAATTCGGGGCGGCGTCCTCCTGATGCTGGCCATGCTG
CTGGCCGGCTGGCTGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKSRSFSFAGWMMAAALSALLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVATVKGEAAFEQDTLTKVIEARA
KATSIQVTPETLNDPAAFNKFQQAQGELGSALSRLMVVSERYPELKANQGFRDLRVQLEGTENRITVARNRYIQAVQEYN
VLTRSFPSNLTAMVFSYSVKPNFNVQNEAQISTPPVVDFKK

Sequences:

>Translated_201_residues
MKSRSFSFAGWMMAAALSALLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVATVKGEAAFEQDTLTKVIEARA
KATSIQVTPETLNDPAAFNKFQQAQGELGSALSRLMVVSERYPELKANQGFRDLRVQLEGTENRITVARNRYIQAVQEYN
VLTRSFPSNLTAMVFSYSVKPNFNVQNEAQISTPPVVDFKK
>Mature_201_residues
MKSRSFSFAGWMMAAALSALLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVATVKGEAAFEQDTLTKVIEARA
KATSIQVTPETLNDPAAFNKFQQAQGELGSALSRLMVVSERYPELKANQGFRDLRVQLEGTENRITVARNRYIQAVQEYN
VLTRSFPSNLTAMVFSYSVKPNFNVQNEAQISTPPVVDFKK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22542; Mature: 22542

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRSFSFAGWMMAAALSALLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVAT
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VKGEAAFEQDTLTKVIEARAKATSIQVTPETLNDPAAFNKFQQAQGELGSALSRLMVVSE
HCCCHHHHHHHHHHHHHHHHHHCEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYPELKANQGFRDLRVQLEGTENRITVARNRYIQAVQEYNVLTRSFPSNLTAMVFSYSVK
HCCCCCCCCCHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEECC
PNFNVQNEAQISTPPVVDFKK
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSRSFSFAGWMMAAALSALLTGCGYNDFQRLDEQTKSAWSEVLNQYQRRADLVPNIVAT
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VKGEAAFEQDTLTKVIEARAKATSIQVTPETLNDPAAFNKFQQAQGELGSALSRLMVVSE
HCCCHHHHHHHHHHHHHHHHHHCEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYPELKANQGFRDLRVQLEGTENRITVARNRYIQAVQEYNVLTRSFPSNLTAMVFSYSVK
HCCCCCCCCCHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEECC
PNFNVQNEAQISTPPVVDFKK
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]