| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is phbI [H]
Identifier: 91786210
GI number: 91786210
Start: 313062
End: 314864
Strand: Direct
Name: phbI [H]
Synonym: Bpro_0299
Alternate gene names: 91786210
Gene position: 313062-314864 (Clockwise)
Preceding gene: 91786209
Following gene: 91786211
Centisome position: 6.02
GC content: 64.73
Gene sequence:
>1803_bases ATGACGTTCTCAGTCCACGGTCTGGCGGTCTCGCGGGGTATTGCGATTGGCCGTGCCGTGCTCGTGGCGTCCAGCCGTGC CGATGTGGCGCACTACTTCGTCGACCCCGCCAGGGTCGTTGAAGAGATCACGCGCGCCCGGGTGGCCCGCAATGCCGTGG CGGAAGAAATTACCCGCCTGCAGCAGGAGCTGCCGCCGGATGCGCCGCACGAACTGGCTGCCCTGCTGGACGTTCACCTG ATGCTGCTGCAGGACGAGCAGCTGATCAGCGGCGTGAAGCACTGGATCACCGAACGCCATTACAACGCCGAGTGGGCATT GGCCACGCAGTACGAAATCATTGCCCGCCAGTTCGATGACATGGAAGACGAGTACCTGCGTGAGCGCAAGGCCGACCTGG AGCAGGTGGTGGAACGCATCCTGCGGTACATGAAAGGCGTGGCCTCACCGGTGCAGCCGGTGGGGCCTGCCGGCGCCGGC CGCAAGCTCTCGCAGGGGCTGCTGCTGGACGACACCATGGATGTGCCCCTGGTGCTGATCGCGCACGACATCTCCCCGGC CGACATGCTGCAGTTCAAGAAGAGCCTGTTTGCCGGTTTTGCGACCGACGTTGGCGGCAAGACCTCGCACACGGCGATCG TGGCGCGCAGCATGGACATCCCGGCGGTGGTGGGCGCGCGCAGCGCCAGCCAGCTGATCGAGCAGGACGACTGGGTCATC ATCGACGGCGACGCCGGTGTGCTGATTGTCGACCCTTCACCCATCATCCTGGCCGAGTACGGTTTCAAGCAGCGCCAGGG TGAGCTGGAGCGCGAGCGGCTGAACCGGCTCAAGCACACCCCCGCCGTGACGATAGACGGACAGAGGGTGGAGCTGCTGG CCAATATTGAAATGCCCGAGGACACCGTGGGCGCGGTCAATGCGGGTGCCGTCGGCGTCGGGCTGTTCCGCAGCGAGTTC CTGTTCATGGGGCGCAGTGGCGACCTCCCCGATGAGGAGGAGCAGTACCAGGCTTACCGCAAAGCTGTTGAGGGCATGCA CGGCCTGCCGGTGACCATTCGCACCGTTGATGTGGGCTCGGACAAACCGCTGGACCGGATCGACAAGGCGCAGGACAGCC ACCTCAATCCGGCGCTGGGCCTGCGCGCCATCCGCTGGAGCCTGGCCGACCCGCCGATGTTTTTGACGCAGCTGCGTGCC ATCCTGCGCGCGGCGGCGCATGGCCAGGTCAATTTGCTGGTGCCCATGCTGGCCCACGGCACCGAGATTCGCCAGACCAT GGCGATGATTGATCACGCACGCGCCACGCTGGACAACAAGGGCACGCCCTATGGCCCGGTGCGTCTGGGCGCCATGATCG AAATTCCGGCGGCTGCGCTCTCGCTCAAGCTTTTCCTCAAATACTTCGACTTTCTGTCCATAGGCACCAATGACCTCATC CAGTACACACTGGCGATTGACCGGGCGGACGAGTCCGTGGCGCATTTGTACGACCCTTGCCATCCGGCGGTGCTGCGTCT GGTGGCCGACACGATCGCCGAATGCAATGCGCAGGGCAAAGGGGTCAGCGTGTGCGGGGAAATGGCTGGCGATGTGAGCA TGACGCGGCTGCTGCTGGGGCTGGGATTGCGCAGCTTTTCCATGCATCCGTCGCGCATCCTGGCGGTCAAGCAGCAAATT TTGCGGGCTGATGCCGGCAAGCTCAGCGTCTGGGCCGCGCAGGTGCTGGATGCCGAGGATCCGGCCGCCCTGATAAACCC TGCCTCAGCGCCCATGCCATCGCCTGTGCCAGCCAACGCCTAG
Upstream 100 bases:
>100_bases TGGGGCTGCCCCGCGGAAAATGATGTTGCCCTTCTTCGTGCCTGCCACACGTATTGACGTATTGAGCATGGCATCTGTTA ATTGGAATAGGGGAATTTGA
Downstream 100 bases:
>100_bases CCGGTCGGGCCGGGGGATCGCCGGTTGAAAATCGACCGCAGCGGTAATATTCCCGTTTTCCCCGTTTTTTTGCCCCATGG CGAGGCTACGAAACCGGGTC
Product: phosphoenolpyruvate--protein phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase system, enzyme I; Protein I [H]
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MTFSVHGLAVSRGIAIGRAVLVASSRADVAHYFVDPARVVEEITRARVARNAVAEEITRLQQELPPDAPHELAALLDVHL MLLQDEQLISGVKHWITERHYNAEWALATQYEIIARQFDDMEDEYLRERKADLEQVVERILRYMKGVASPVQPVGPAGAG RKLSQGLLLDDTMDVPLVLIAHDISPADMLQFKKSLFAGFATDVGGKTSHTAIVARSMDIPAVVGARSASQLIEQDDWVI IDGDAGVLIVDPSPIILAEYGFKQRQGELERERLNRLKHTPAVTIDGQRVELLANIEMPEDTVGAVNAGAVGVGLFRSEF LFMGRSGDLPDEEEQYQAYRKAVEGMHGLPVTIRTVDVGSDKPLDRIDKAQDSHLNPALGLRAIRWSLADPPMFLTQLRA ILRAAAHGQVNLLVPMLAHGTEIRQTMAMIDHARATLDNKGTPYGPVRLGAMIEIPAAALSLKLFLKYFDFLSIGTNDLI QYTLAIDRADESVAHLYDPCHPAVLRLVADTIAECNAQGKGVSVCGEMAGDVSMTRLLLGLGLRSFSMHPSRILAVKQQI LRADAGKLSVWAAQVLDAEDPAALINPASAPMPSPVPANA
Sequences:
>Translated_600_residues MTFSVHGLAVSRGIAIGRAVLVASSRADVAHYFVDPARVVEEITRARVARNAVAEEITRLQQELPPDAPHELAALLDVHL MLLQDEQLISGVKHWITERHYNAEWALATQYEIIARQFDDMEDEYLRERKADLEQVVERILRYMKGVASPVQPVGPAGAG RKLSQGLLLDDTMDVPLVLIAHDISPADMLQFKKSLFAGFATDVGGKTSHTAIVARSMDIPAVVGARSASQLIEQDDWVI IDGDAGVLIVDPSPIILAEYGFKQRQGELERERLNRLKHTPAVTIDGQRVELLANIEMPEDTVGAVNAGAVGVGLFRSEF LFMGRSGDLPDEEEQYQAYRKAVEGMHGLPVTIRTVDVGSDKPLDRIDKAQDSHLNPALGLRAIRWSLADPPMFLTQLRA ILRAAAHGQVNLLVPMLAHGTEIRQTMAMIDHARATLDNKGTPYGPVRLGAMIEIPAAALSLKLFLKYFDFLSIGTNDLI QYTLAIDRADESVAHLYDPCHPAVLRLVADTIAECNAQGKGVSVCGEMAGDVSMTRLLLGLGLRSFSMHPSRILAVKQQI LRADAGKLSVWAAQVLDAEDPAALINPASAPMPSPVPANA >Mature_599_residues TFSVHGLAVSRGIAIGRAVLVASSRADVAHYFVDPARVVEEITRARVARNAVAEEITRLQQELPPDAPHELAALLDVHLM LLQDEQLISGVKHWITERHYNAEWALATQYEIIARQFDDMEDEYLRERKADLEQVVERILRYMKGVASPVQPVGPAGAGR KLSQGLLLDDTMDVPLVLIAHDISPADMLQFKKSLFAGFATDVGGKTSHTAIVARSMDIPAVVGARSASQLIEQDDWVII DGDAGVLIVDPSPIILAEYGFKQRQGELERERLNRLKHTPAVTIDGQRVELLANIEMPEDTVGAVNAGAVGVGLFRSEFL FMGRSGDLPDEEEQYQAYRKAVEGMHGLPVTIRTVDVGSDKPLDRIDKAQDSHLNPALGLRAIRWSLADPPMFLTQLRAI LRAAAHGQVNLLVPMLAHGTEIRQTMAMIDHARATLDNKGTPYGPVRLGAMIEIPAAALSLKLFLKYFDFLSIGTNDLIQ YTLAIDRADESVAHLYDPCHPAVLRLVADTIAECNAQGKGVSVCGEMAGDVSMTRLLLGLGLRSFSMHPSRILAVKQQIL RADAGKLSVWAAQVLDAEDPAALINPASAPMPSPVPANA
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=573, Percent_Identity=35.4275741710297, Blast_Score=336, Evalue=3e-93, Organism=Escherichia coli, GI1789193, Length=552, Percent_Identity=33.5144927536232, Blast_Score=265, Evalue=6e-72, Organism=Escherichia coli, GI1788726, Length=592, Percent_Identity=30.7432432432432, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI48994992, Length=504, Percent_Identity=33.1349206349206, Blast_Score=244, Evalue=2e-65, Organism=Escherichia coli, GI1787994, Length=458, Percent_Identity=24.4541484716157, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI226510935, Length=182, Percent_Identity=24.1758241758242, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 65353; Mature: 65222
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSVHGLAVSRGIAIGRAVLVASSRADVAHYFVDPARVVEEITRARVARNAVAEEITRL CEEEEEHHHHHCCHHHHHHHEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QQELPPDAPHELAALLDVHLMLLQDEQLISGVKHWITERHYNAEWALATQYEIIARQFDD HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCC MEDEYLRERKADLEQVVERILRYMKGVASPVQPVGPAGAGRKLSQGLLLDDTMDVPLVLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEECCCCCCCEEEE AHDISPADMLQFKKSLFAGFATDVGGKTSHTAIVARSMDIPAVVGARSASQLIEQDDWVI EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHCCCCEEE IDGDAGVLIVDPSPIILAEYGFKQRQGELERERLNRLKHTPAVTIDGQRVELLANIEMPE EECCCCEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCC DTVGAVNAGAVGVGLFRSEFLFMGRSGDLPDEEEQYQAYRKAVEGMHGLPVTIRTVDVGS HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC DKPLDRIDKAQDSHLNPALGLRAIRWSLADPPMFLTQLRAILRAAAHGQVNLLVPMLAHG CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCC TEIRQTMAMIDHARATLDNKGTPYGPVRLGAMIEIPAAALSLKLFLKYFDFLSIGTNDLI HHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEECCHHHHHHHHHHHHHHHHHCCCHHHE QYTLAIDRADESVAHLYDPCHPAVLRLVADTIAECNAQGKGVSVCGEMAGDVSMTRLLLG EEHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHH LGLRSFSMHPSRILAVKQQILRADAGKLSVWAAQVLDAEDPAALINPASAPMPSPVPANA HCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TFSVHGLAVSRGIAIGRAVLVASSRADVAHYFVDPARVVEEITRARVARNAVAEEITRL EEEEEHHHHHCCHHHHHHHEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QQELPPDAPHELAALLDVHLMLLQDEQLISGVKHWITERHYNAEWALATQYEIIARQFDD HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCC MEDEYLRERKADLEQVVERILRYMKGVASPVQPVGPAGAGRKLSQGLLLDDTMDVPLVLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEECCCCCCCEEEE AHDISPADMLQFKKSLFAGFATDVGGKTSHTAIVARSMDIPAVVGARSASQLIEQDDWVI EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHCCCCEEE IDGDAGVLIVDPSPIILAEYGFKQRQGELERERLNRLKHTPAVTIDGQRVELLANIEMPE EECCCCEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCC DTVGAVNAGAVGVGLFRSEFLFMGRSGDLPDEEEQYQAYRKAVEGMHGLPVTIRTVDVGS HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC DKPLDRIDKAQDSHLNPALGLRAIRWSLADPPMFLTQLRAILRAAAHGQVNLLVPMLAHG CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCC TEIRQTMAMIDHARATLDNKGTPYGPVRLGAMIEIPAAALSLKLFLKYFDFLSIGTNDLI HHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEECCHHHHHHHHHHHHHHHHHCCCHHHE QYTLAIDRADESVAHLYDPCHPAVLRLVADTIAECNAQGKGVSVCGEMAGDVSMTRLLLG EEHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHH LGLRSFSMHPSRILAVKQQILRADAGKLSVWAAQVLDAEDPAALINPASAPMPSPVPANA HCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1653223 [H]