The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yidY [C]

Identifier: 91786207

GI number: 91786207

Start: 310924

End: 312219

Strand: Direct

Name: yidY [C]

Synonym: Bpro_0296

Alternate gene names: 91786207

Gene position: 310924-312219 (Clockwise)

Preceding gene: 91786206

Following gene: 91786208

Centisome position: 5.98

GC content: 64.58

Gene sequence:

>1296_bases
ATGACAAAGGCCCAGAACGCCTCGCCAGCGATGCCGGTGGCAACAGCTTGCCCGGCCTCGTCTCTCCCGCTGGACAGGAA
AACCGCCGCCATCGTGTTCCTGGCCTTTGCGGCTGCCTATTTCTGTTCTGCGCTGGTGCGGGCCATCACGGCCACGCTGT
CGCCCGTGTTGAGTCAGGACTTTGCCCTGCAGGCACGTGACTTGGGGCTGCTGGGGGCGGGCTATTTCCTGGGGTTTGCG
TCCACTCAGTTGCCGCTGGGAGCCTGGCTGGACCGCCATGGCCCCAAGCGGGTGATCCTGTGTTTCCTGAGCCTGGCCGT
GCTGGGTTGCCTGGCGTTTTCGCTGGCGGGTACCTTTGCCTGGCTGCTTGCCGCCCGCGTGCTGGTGGGCATGGGCGTCA
GCGCCTGTCTGATGGCCCCTCTGACGGGCTATCGCCGCTGGTTTGACGGGCCTGCCGTTTTGCGCGCCAATTCCTGGATG
CTGATGACGGGCTCGCTCGGCATGCTGGCTTCCACCCTGCCGGTGCAATGGCTGATGCCGTTGACGGGCTGGCGTCCGCT
GTTCTGGATTCTGGCGGCGATGATTTTGCTGTCGATGGGCGTGATCGCCTGGGTGGTGCCTGCATGGCAGAAGAATGCCG
ACGCAACCCCCGGAGCTCCCGGGACGGCGGGCGCAGAGGCAAGCTACGCAATGGTCTGGCGCAGCCGGTATTTCCAGAAA
ATGTCGCCGCTGGCTTTCTTCAATTACGGCGGCCTGGTGGCCGTGCAGACGCTGTGGGCCGGCCCGTGGATGGTCAAGGT
GGCGGGCTATACCCCGCTGGAAGCGGCCACCGGTCTTTTCTACATCAACGCCGCCATGCTGGTGACTTTCTGGGCCTGGG
GCATGGTCAACCCCTGGCTGGTCGGACGAGGCTGGAGCGCCAACCGGCTGATCGGCTGGGGCGTGCCCGTCAGCCTGCTG
GTGCTGGCCGCCAACATCTTCGCCGGCAGCGCCACCGGGTGGCTGGGCTGGGCTCTTTTTTGCATGAGTTCCAGCGCCCT
GGGCCTGGCCCAGCCGGCGGTGGGCATGGCGTTCAGCCCTTCACTGGCCGGGCGCGCCATGTCGGCCTACAACCTGATGA
TCTTTGGCGGCGTGTTTGTGGTGCAATGGGGCATTGGGCTGGCTGTCGACGCATTCAGGGCCGCCGGGCTGACCGAAGTG
GCCAGCTTTCAGGCGGCCATGGGCGTGTTTTTATGTTGCTGTATCGCCTCATATGGGTATTTCCTCAGTGTGAACGCTGA
TAATTCACCGCAATGA

Upstream 100 bases:

>100_bases
AAATCCGACACACGCCCCAAACACGCATCCCCACGCGCACATTCCTAAACACAAGTCCATAAGATAAAGACGTAAAGATG
CGGACGAGACCCCCTGCTTT

Downstream 100 bases:

>100_bases
ACGGCATTTTCATCATCGCCCATGCCCCGCTGGCTTCCGCCCTGCGCCACTGCATGCTGCATGTGTTTCCCGACAACGCA
GCGGGCGTTGCGGCGCTGGA

Product: major facilitator transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Transporter MFS Superfamily; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTKAQNASPAMPVATACPASSLPLDRKTAAIVFLAFAAAYFCSALVRAITATLSPVLSQDFALQARDLGLLGAGYFLGFA
STQLPLGAWLDRHGPKRVILCFLSLAVLGCLAFSLAGTFAWLLAARVLVGMGVSACLMAPLTGYRRWFDGPAVLRANSWM
LMTGSLGMLASTLPVQWLMPLTGWRPLFWILAAMILLSMGVIAWVVPAWQKNADATPGAPGTAGAEASYAMVWRSRYFQK
MSPLAFFNYGGLVAVQTLWAGPWMVKVAGYTPLEAATGLFYINAAMLVTFWAWGMVNPWLVGRGWSANRLIGWGVPVSLL
VLAANIFAGSATGWLGWALFCMSSSALGLAQPAVGMAFSPSLAGRAMSAYNLMIFGGVFVVQWGIGLAVDAFRAAGLTEV
ASFQAAMGVFLCCCIASYGYFLSVNADNSPQ

Sequences:

>Translated_431_residues
MTKAQNASPAMPVATACPASSLPLDRKTAAIVFLAFAAAYFCSALVRAITATLSPVLSQDFALQARDLGLLGAGYFLGFA
STQLPLGAWLDRHGPKRVILCFLSLAVLGCLAFSLAGTFAWLLAARVLVGMGVSACLMAPLTGYRRWFDGPAVLRANSWM
LMTGSLGMLASTLPVQWLMPLTGWRPLFWILAAMILLSMGVIAWVVPAWQKNADATPGAPGTAGAEASYAMVWRSRYFQK
MSPLAFFNYGGLVAVQTLWAGPWMVKVAGYTPLEAATGLFYINAAMLVTFWAWGMVNPWLVGRGWSANRLIGWGVPVSLL
VLAANIFAGSATGWLGWALFCMSSSALGLAQPAVGMAFSPSLAGRAMSAYNLMIFGGVFVVQWGIGLAVDAFRAAGLTEV
ASFQAAMGVFLCCCIASYGYFLSVNADNSPQ
>Mature_430_residues
TKAQNASPAMPVATACPASSLPLDRKTAAIVFLAFAAAYFCSALVRAITATLSPVLSQDFALQARDLGLLGAGYFLGFAS
TQLPLGAWLDRHGPKRVILCFLSLAVLGCLAFSLAGTFAWLLAARVLVGMGVSACLMAPLTGYRRWFDGPAVLRANSWML
MTGSLGMLASTLPVQWLMPLTGWRPLFWILAAMILLSMGVIAWVVPAWQKNADATPGAPGTAGAEASYAMVWRSRYFQKM
SPLAFFNYGGLVAVQTLWAGPWMVKVAGYTPLEAATGLFYINAAMLVTFWAWGMVNPWLVGRGWSANRLIGWGVPVSLLV
LAANIFAGSATGWLGWALFCMSSSALGLAQPAVGMAFSPSLAGRAMSAYNLMIFGGVFVVQWGIGLAVDAFRAAGLTEVA
SFQAAMGVFLCCCIASYGYFLSVNADNSPQ

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45706; Mature: 45575

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAQNASPAMPVATACPASSLPLDRKTAAIVFLAFAAAYFCSALVRAITATLSPVLSQD
CCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALQARDLGLLGAGYFLGFASTQLPLGAWLDRHGPKRVILCFLSLAVLGCLAFSLAGTFA
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLLAARVLVGMGVSACLMAPLTGYRRWFDGPAVLRANSWMLMTGSLGMLASTLPVQWLMP
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHHCCHHHHHC
LTGWRPLFWILAAMILLSMGVIAWVVPAWQKNADATPGAPGTAGAEASYAMVWRSRYFQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
MSPLAFFNYGGLVAVQTLWAGPWMVKVAGYTPLEAATGLFYINAAMLVTFWAWGMVNPWL
CCCCEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VGRGWSANRLIGWGVPVSLLVLAANIFAGSATGWLGWALFCMSSSALGLAQPAVGMAFSP
EECCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECC
SLAGRAMSAYNLMIFGGVFVVQWGIGLAVDAFRAAGLTEVASFQAAMGVFLCCCIASYGY
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
FLSVNADNSPQ
EEEECCCCCCC
>Mature Secondary Structure 
TKAQNASPAMPVATACPASSLPLDRKTAAIVFLAFAAAYFCSALVRAITATLSPVLSQD
CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALQARDLGLLGAGYFLGFASTQLPLGAWLDRHGPKRVILCFLSLAVLGCLAFSLAGTFA
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLLAARVLVGMGVSACLMAPLTGYRRWFDGPAVLRANSWMLMTGSLGMLASTLPVQWLMP
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHHCCHHHHHC
LTGWRPLFWILAAMILLSMGVIAWVVPAWQKNADATPGAPGTAGAEASYAMVWRSRYFQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
MSPLAFFNYGGLVAVQTLWAGPWMVKVAGYTPLEAATGLFYINAAMLVTFWAWGMVNPWL
CCCCEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VGRGWSANRLIGWGVPVSLLVLAANIFAGSATGWLGWALFCMSSSALGLAQPAVGMAFSP
EECCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECC
SLAGRAMSAYNLMIFGGVFVVQWGIGLAVDAFRAAGLTEVASFQAAMGVFLCCCIASYGY
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
FLSVNADNSPQ
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA