| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786206
Identifier: 91786206
GI number: 91786206
Start: 310241
End: 310825
Strand: Direct
Name: 91786206
Synonym: Bpro_0295
Alternate gene names: NA
Gene position: 310241-310825 (Clockwise)
Preceding gene: 91786199
Following gene: 91786207
Centisome position: 5.97
GC content: 68.38
Gene sequence:
>585_bases ATGCCACGACAGACCCGGACCTTTTCAATTGTTGCCATGACGGCGTTGCTGGCGCTGGCCCTCACGGCCTGCAGCCCCGC CTTCAACTGGCGCGAGGTACGCCCCGACAACACCCGCCTCAGCCTGTTGTTGCCCTGCAAGCCGGACAAGGCGCAAAAAA CCGTGCCGCTGGGCGGCCAGCCGACCGTGCTGGCCATGCTGGGCTGCGATGCCGGCGGCGCGACTTTTGCCGTGGCAGTG GCCGACCTGGGGGATGCGGCCAAGGTTGGCCCCGTTCTGGCCCAGTGGCAGAGCCTGACACTGGCCAACATGAAAGCCGG GCCGCGGGCTGCCGGCCCCGGGCCGGGGGGCACACAGGTTGTGCCGCTCAAGCTTCCCGGCGCATCGGCGGAGCCCGCAC CCCTGCTGGTGAGCGCCCAGGGGCAGCGCGCTGACGGAACGGCCGTGATGGGCCGGGCCGCCTACTTCGCCCAGGGATCG CAGGTCTTTCAGGTGGTGATGTATGCGGGGGCAACCAAGCGGGACGCAGCGCCCCAGGCGGTCGAAGTGGCCGAGACTTT TTTCGCAAGCCTCAAGTTCGAATAA
Upstream 100 bases:
>100_bases CACCGCCCGGCCCCAGGATGGCGCGCGAATGGCTGTAAAGTGCGATGCTTGCTGACCTACCTCCCACCACGACCTGACCC AAGAGAGCTGAGAGCGCCTG
Downstream 100 bases:
>100_bases ATCCGACACACGCCCCAAACACGCATCCCCACGCGCACATTCCTAAACACAAGTCCATAAGATAAAGACGTAAAGATGCG GACGAGACCCCCTGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPRQTRTFSIVAMTALLALALTACSPAFNWREVRPDNTRLSLLLPCKPDKAQKTVPLGGQPTVLAMLGCDAGGATFAVAV ADLGDAAKVGPVLAQWQSLTLANMKAGPRAAGPGPGGTQVVPLKLPGASAEPAPLLVSAQGQRADGTAVMGRAAYFAQGS QVFQVVMYAGATKRDAAPQAVEVAETFFASLKFE
Sequences:
>Translated_194_residues MPRQTRTFSIVAMTALLALALTACSPAFNWREVRPDNTRLSLLLPCKPDKAQKTVPLGGQPTVLAMLGCDAGGATFAVAV ADLGDAAKVGPVLAQWQSLTLANMKAGPRAAGPGPGGTQVVPLKLPGASAEPAPLLVSAQGQRADGTAVMGRAAYFAQGS QVFQVVMYAGATKRDAAPQAVEVAETFFASLKFE >Mature_193_residues PRQTRTFSIVAMTALLALALTACSPAFNWREVRPDNTRLSLLLPCKPDKAQKTVPLGGQPTVLAMLGCDAGGATFAVAVA DLGDAAKVGPVLAQWQSLTLANMKAGPRAAGPGPGGTQVVPLKLPGASAEPAPLLVSAQGQRADGTAVMGRAAYFAQGSQ VFQVVMYAGATKRDAAPQAVEVAETFFASLKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19965; Mature: 19834
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQTRTFSIVAMTALLALALTACSPAFNWREVRPDNTRLSLLLPCKPDKAQKTVPLGGQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC PTVLAMLGCDAGGATFAVAVADLGDAAKVGPVLAQWQSLTLANMKAGPRAAGPGPGGTQV CEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEE VPLKLPGASAEPAPLLVSAQGQRADGTAVMGRAAYFAQGSQVFQVVMYAGATKRDAAPQA EEEECCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCHH VEVAETFFASLKFE HHHHHHHHHHHCCC >Mature Secondary Structure PRQTRTFSIVAMTALLALALTACSPAFNWREVRPDNTRLSLLLPCKPDKAQKTVPLGGQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCC PTVLAMLGCDAGGATFAVAVADLGDAAKVGPVLAQWQSLTLANMKAGPRAAGPGPGGTQV CEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEE VPLKLPGASAEPAPLLVSAQGQRADGTAVMGRAAYFAQGSQVFQVVMYAGATKRDAAPQA EEEECCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCHH VEVAETFFASLKFE HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA