| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nrtB [H]
Identifier: 91786202
GI number: 91786202
Start: 305642
End: 306505
Strand: Reverse
Name: nrtB [H]
Synonym: Bpro_0291
Alternate gene names: 91786202
Gene position: 306505-305642 (Counterclockwise)
Preceding gene: 91786203
Following gene: 91786201
Centisome position: 5.89
GC content: 61.0
Gene sequence:
>864_bases ATGAAATCATTAAATCTCAAGGCGGGCCTGGTCTCGCTGCTCATCTTCCTGGCCTTCCTGGGCATCTGGTACACCGCCAC GCTGCCTTCGCCCGGCACGCCCGTAGCCAGCACCGCGGGACTGAGCGCCGAACAGATCGAATACCAGAAGATGATGGGCA AGGACCCGGGCAGTACCAAGACCACCGGATTTCCGACGCTGGGCCAGATGGGCGCGGCGATCTGGAAGCAGGTCTCCAAC CCGCTGTATGACAACGGCCCCAATGACAAGGGCATTTTGATCCAGCTCGGCCATTCGCTGGCGCGCGTGGGCCTGGGCTT TTTGCTGGCCTGCGCGGTGGCCGTGCCGCTAGGCTTTGTGATCGGCATGTCGCCCCTGCTGCGGCGTGCGTTTGACCCCT TCATCCAGGTGCTCAAGCCGATCTCGCCGCTGGCCTGGATGCCGCTGGCGCTTTACACCATCAAGGACTCGTCCATCTCG GGCATCTTTGTGATTTTCATCTGCTCGGTCTGGCCCATGCTGATCAACACGGCCTTTGGCGTGTCAGCCGTCAAGCGCGA GTGGCTCAATGTGGCCAGCACGCTGGAAGTCAGCCCGCTGCGCAAGGCCTTCCTGGTGATCCTGCCAGCGGCAGCGCCCA CCATTTTTACCGGCATGCGCATTTCCATGGGCATCGCCTGGCTGGTGATTGTGGCCGCCGAGATGCTGGTGGGCGGCACC GGCATTGGCTACTTTGTCTGGAACGAGTGGAACAACCTGTCGCTGACCAACGTGATCTTTGCCATTCTCGTGATCGGCAT CGTCGGCATGCTGCTGGACCTCAGCTTTGCCCAGTTGCAGAAGATGGTGACGTATGTGGAGTGA
Upstream 100 bases:
>100_bases CCCTCAAGGGGCCGCTGCGCCTGCGGCCCGGCAAAGCCGGTTCCGCGGCCCCTGCTTGGTTCTCATTGAAATCCCACGCT CGCTCACTTCTTGTAGCTCC
Downstream 100 bases:
>100_bases AGCCGCCATGCGCCCCGCCTTGCACACCGACACGACGGGCCTTCAGGGCCCTCACGCAGCACCCAGCCTCTCCCGGAAAG AACACAGCATGCAGGGATTC
Product: nitrate transport permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE
Sequences:
>Translated_287_residues MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE >Mature_287_residues MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=200, Percent_Identity=32.5, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87081802, Length=155, Percent_Identity=30.3225806451613, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30882; Mature: 30882
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCC TTGFPTLGQMGAAIWKQVSNPLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH IGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSISGIFVIFICSVWPMLINTAFG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCC TTGFPTLGQMGAAIWKQVSNPLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH IGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSISGIFVIFICSVWPMLINTAFG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]