| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cynS
Identifier: 91786200
GI number: 91786200
Start: 304250
End: 304693
Strand: Reverse
Name: cynS
Synonym: Bpro_0289
Alternate gene names: 91786200
Gene position: 304693-304250 (Counterclockwise)
Preceding gene: 91786201
Following gene: 91786192
Centisome position: 5.86
GC content: 57.43
Gene sequence:
>444_bases ATGAACCGCAACGACATCACCGAAAAAATCATCACCACCAAGGTTGCCAAGGGCATCACCTGGGAATCGGTCGCCAAAAA GGTGGGCCTCAGCAAGGAATGGGTCACCGCCGGCTGCCTGGGCCAGATGACCTTTGACGAGAAACAGGCCAAAGTCGTCG GCAAGATTTTTGGCCTAACAGCCGAGGAGCAAAAGTGGCTGCAGGTCGTGCCGTACAAGGGCTCGCTGCCAACGCCCGTG CCCACCGACCCGCTGATCTACCGCTGGTACGAGATCGTCAGCGTCTATGGCACCACCATCAAGGAACTGATTCACGAAGA GTTCGGCGACGGCATCATGAGCGCCATCGACTTCAGCATGGACATCGTGCGCCAGCCCGACCCAAAGGGCGACCGTGTCA ACGTGGTGCTGTCGGGAAAGTTTTTGCCGTACAAGACCTATTGA
Upstream 100 bases:
>100_bases TCGATTTTCTCGTCATGCGCGCCAAGGCGCATTGACGCCCGACCCGAACACCACCCTTCACAACCGCCTCAAAACCACTT CAAACACAGGAGCCATAGAC
Downstream 100 bases:
>100_bases CCCTGTCAGCGGAGCCGCAGCCGGCGCGTTGCAATTTTCCGACGGGCCGCTCCCAAGAAAAATTAGCCCCCTCGGGGGCA GCGTTTGCACGCAGTGAAAA
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNRNDITEKIITTKVAKGITWESVAKKVGLSKEWVTAGCLGQMTFDEKQAKVVGKIFGLTAEEQKWLQVVPYKGSLPTPV PTDPLIYRWYEIVSVYGTTIKELIHEEFGDGIMSAIDFSMDIVRQPDPKGDRVNVVLSGKFLPYKTY
Sequences:
>Translated_147_residues MNRNDITEKIITTKVAKGITWESVAKKVGLSKEWVTAGCLGQMTFDEKQAKVVGKIFGLTAEEQKWLQVVPYKGSLPTPV PTDPLIYRWYEIVSVYGTTIKELIHEEFGDGIMSAIDFSMDIVRQPDPKGDRVNVVLSGKFLPYKTY >Mature_147_residues MNRNDITEKIITTKVAKGITWESVAKKVGLSKEWVTAGCLGQMTFDEKQAKVVGKIFGLTAEEQKWLQVVPYKGSLPTPV PTDPLIYRWYEIVSVYGTTIKELIHEEFGDGIMSAIDFSMDIVRQPDPKGDRVNVVLSGKFLPYKTY
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family
Homologues:
Organism=Escherichia coli, GI1786535, Length=151, Percent_Identity=40.3973509933775, Blast_Score=134, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYNS_POLSJ (Q12GT8)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547152.1 - ProteinModelPortal: Q12GT8 - SMR: Q12GT8 - STRING: Q12GT8 - GeneID: 4011660 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0289 - NMPDR: fig|296591.1.peg.3548 - eggNOG: COG1513 - HOGENOM: HBG317643 - OMA: SAIDFDM - ProtClustDB: PRK02866 - BioCyc: PSP296591:BPRO_0289-MONOMER - HAMAP: MF_00535 - InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 - Gene3D: G3DSA:3.30.1160.10 - PIRSF: PIRSF001263 - PRINTS: PR01693 - TIGRFAMs: TIGR00673
Pfam domain/function: PF02560 Cyanate_lyase; SSF55234 Cyanate_lyase_C; SSF47413 Lambda_like_DNA
EC number: =4.2.1.104
Molecular weight: Translated: 16559; Mature: 16559
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: ACT_SITE 88-88 ACT_SITE 91-91 ACT_SITE 114-114
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNDITEKIITTKVAKGITWESVAKKVGLSKEWVTAGCLGQMTFDEKQAKVVGKIFGLT CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC AEEQKWLQVVPYKGSLPTPVPTDPLIYRWYEIVSVYGTTIKELIHEEFGDGIMSAIDFSM CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DIVRQPDPKGDRVNVVLSGKFLPYKTY HHHCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MNRNDITEKIITTKVAKGITWESVAKKVGLSKEWVTAGCLGQMTFDEKQAKVVGKIFGLT CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC AEEQKWLQVVPYKGSLPTPVPTDPLIYRWYEIVSVYGTTIKELIHEEFGDGIMSAIDFSM CCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DIVRQPDPKGDRVNVVLSGKFLPYKTY HHHCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA