| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786157
Identifier: 91786157
GI number: 91786157
Start: 269262
End: 269696
Strand: Direct
Name: 91786157
Synonym: Bpro_0246
Alternate gene names: NA
Gene position: 269262-269696 (Clockwise)
Preceding gene: 91786154
Following gene: 91786158
Centisome position: 5.18
GC content: 62.07
Gene sequence:
>435_bases ATGCTCTGGGTCAAATCACTTCACATCGTTTTTGTTGCCAGCTGGTTTGCGGGGCTGTTTTACCTGCCGCGCATTTTTGT GAACCTGGCCCTGGTGCCGCCCGAGAGCGTGGCCGAGCGCGAGCGGCTGATCCTGATGGCGCGCAAACTGATGCGCTTCA CCACCATCCTGGCGGTTCCGGCCCTGGGTTTTGGCTTGTGGCTGTATCTTGGCTACGGCATCGGGCGCGGCCCCGGCAAT GCCTGGATGCATGCCAAGCTGGGTGTTGTGGTGCTGGCCCTGGGCTATCACCACGCCTGTGGGCGACTGCTCGGCAAATT TGTCAGCAACCGCAGCACGCGCAGCCATGTCTGGTTTCGCTGGTTCAATGAAGTGCCCGTGCTGCTGCTGGCGGCCGCCG TCATCCTGGTGGTGGTCAAGCCTTGGCAGGGCTAG
Upstream 100 bases:
>100_bases AGGGGCCGCGGAACCGGCTTAGCCGGGCCGCAGGCGCAGCGGCCCCCTCGGGGGGCAGCGCATTACACGAAGTGAAAAGC GTGGGGGCTACACTCCCCCG
Downstream 100 bases:
>100_bases TACTCCGACCCAGAAATATCGAAACATGAAAGCGCGCCTTCGAACCCATGCCGTCGTTGCAAATCCTCGCCATAGCTACA GCTATGTCTGCGGTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLWVKSLHIVFVASWFAGLFYLPRIFVNLALVPPESVAERERLILMARKLMRFTTILAVPALGFGLWLYLGYGIGRGPGN AWMHAKLGVVVLALGYHHACGRLLGKFVSNRSTRSHVWFRWFNEVPVLLLAAAVILVVVKPWQG
Sequences:
>Translated_144_residues MLWVKSLHIVFVASWFAGLFYLPRIFVNLALVPPESVAERERLILMARKLMRFTTILAVPALGFGLWLYLGYGIGRGPGN AWMHAKLGVVVLALGYHHACGRLLGKFVSNRSTRSHVWFRWFNEVPVLLLAAAVILVVVKPWQG >Mature_144_residues MLWVKSLHIVFVASWFAGLFYLPRIFVNLALVPPESVAERERLILMARKLMRFTTILAVPALGFGLWLYLGYGIGRGPGN AWMHAKLGVVVLALGYHHACGRLLGKFVSNRSTRSHVWFRWFNEVPVLLLAAAVILVVVKPWQG
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR008457 - InterPro: IPR005265 [H]
Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 16225; Mature: 16225
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWVKSLHIVFVASWFAGLFYLPRIFVNLALVPPESVAERERLILMARKLMRFTTILAVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGFGLWLYLGYGIGRGPGNAWMHAKLGVVVLALGYHHACGRLLGKFVSNRSTRSHVWFR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH WFNEVPVLLLAAAVILVVVKPWQG HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLWVKSLHIVFVASWFAGLFYLPRIFVNLALVPPESVAERERLILMARKLMRFTTILAVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGFGLWLYLGYGIGRGPGNAWMHAKLGVVVLALGYHHACGRLLGKFVSNRSTRSHVWFR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH WFNEVPVLLLAAAVILVVVKPWQG HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]