The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yrbE [C]

Identifier: 91786141

GI number: 91786141

Start: 252876

End: 254027

Strand: Direct

Name: yrbE [C]

Synonym: Bpro_0230

Alternate gene names: 91786141

Gene position: 252876-254027 (Clockwise)

Preceding gene: 91786136

Following gene: 91786142

Centisome position: 4.86

GC content: 65.19

Gene sequence:

>1152_bases
ATGCTTATGGAAGAATCCACGCCCCGCATTGAACAGCAGGACACAGCCGAAGGCCGGCGGTTTGTCGTGCGGGGGGCATG
GACGGCCTCGGACCTCACGGGCCGGCTGGTATGGGACACCCTGACGGCACAGCTTGAGATCCTGCGCCGCCATGCCGCGC
CCGCTGGCGAGGCGTCGACCGTCCGGTGGGATTTGAGCGGGCTCGAGAAGCTCGACCACCTCGGTGCCCAGGTGCTGTGG
AATCACTGGGGCCGCGACTGGCCGGCACAGCTGCAGGTCGAACCCAGCCAGCGTGCGGTGCTGGAGACCGTGGCCAAATT
CGCGGTCGTCCCGCCAAAACCGCGCGGGTCCGACTGGAAGGACCTCCTGGTGCTACTTGGCAACCGGGCGCTGGACCTGG
TCGATCACAGCAAGGGCCTGGTGCGCCTGGTGGGCCAGTTGCTGCTCGACATCATCCGGCTTGTCCGGCACCCGAAGGAG
GGCCCCTGGCGTGATCTCTCGGGTCACCTGTACCACATTGGCGCCACGGCGCTGCCCATTACCGCGCTGGTGGGATTTCT
GATCGGCGTCGTGCTGGCCTACCTGATTTCGCAGCAGCTGCGCCAGTTCGGGGCAGATGCCTACATCGTGAATATTCTTG
GCATCTCGCTGATCCGGGAACTCGGGCCGGTATTGGCGGCCATTCTTATCGCGGGGCGCTCCGGCTCCGCCATCACCGCC
CAGATTGGCGTGATGCGCGTGACCGAAGAACTCGACGCCATGCGGGTGATGGGCATCGCCCGGGGCTTCCGGCTGGTGAT
GCCGCGGGCGCTGGCATTGGCGGTGGTGATGCCGCTGATCAGCGTCTGGACCACGATTGCCGCCCTGCTCGGCGGCATGC
TGGCCGCCGATATCTCCATGGGTGTGACGCCCTCGTACTTCATCAACTCGCTGCCGCGTGCGGTGGATGCCGCCAACCTG
ACGCTGGCCACCGGCAAGTCGGTCGTGTTTGGCGTGCTGATCGCCATGGTGGGATGCCATTACGGCCTGCGTGTCAAACC
CAATACCGAGAGCCTGGGGCAGGGCACCACCGCCTCGGTGGTTACGTCGATCACCGTGGTGATTCTGGTGGACGCGTTGT
TTGCGGTCGTGTTTAAAAGCGTGGGCATATGA

Upstream 100 bases:

>100_bases
AACCGTGCACATCTGCCCGAATGGGTATTGCCAACAGTTACCATGACAATTTTGCGCGGCCGCGCATGCAAAGGTCACCG
GCCTGCGCCCCGCCTCAGTC

Downstream 100 bases:

>100_bases
ATGTCGCCCCCACGCTTGTCACTGCGTGTACTGCGCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGCAAAGCCAG
TCCCGCGGCCCCTGCTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLMEESTPRIEQQDTAEGRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQVLW
NHWGRDWPAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWKDLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKE
GPWRDLSGHLYHIGATALPITALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITA
QIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPSYFINSLPRAVDAANL
TLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSITVVILVDALFAVVFKSVGI

Sequences:

>Translated_383_residues
MLMEESTPRIEQQDTAEGRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQVLW
NHWGRDWPAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWKDLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKE
GPWRDLSGHLYHIGATALPITALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITA
QIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPSYFINSLPRAVDAANL
TLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSITVVILVDALFAVVFKSVGI
>Mature_383_residues
MLMEESTPRIEQQDTAEGRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQVLW
NHWGRDWPAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWKDLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKE
GPWRDLSGHLYHIGATALPITALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITA
QIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPSYFINSLPRAVDAANL
TLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSITVVILVDALFAVVFKSVGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=204, Percent_Identity=33.8235294117647, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41311; Mature: 41311

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMEESTPRIEQQDTAEGRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEAST
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
VRWDLSGLEKLDHLGAQVLWNHWGRDWPAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWK
EEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHH
DLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKEGPWRDLSGHLYHIGATALPI
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHH
TALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
QIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVTPSYFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASV
CCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEECCCCHHHCCCCHHHH
VTSITVVILVDALFAVVFKSVGI
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLMEESTPRIEQQDTAEGRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEAST
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
VRWDLSGLEKLDHLGAQVLWNHWGRDWPAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWK
EEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHH
DLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKEGPWRDLSGHLYHIGATALPI
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHH
TALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
QIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVTPSYFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASV
CCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEECCCCHHHCCCCHHHH
VTSITVVILVDALFAVVFKSVGI
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]