| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ktrA [H]
Identifier: 91786125
GI number: 91786125
Start: 234130
End: 234804
Strand: Reverse
Name: ktrA [H]
Synonym: Bpro_0214
Alternate gene names: 91786125
Gene position: 234804-234130 (Counterclockwise)
Preceding gene: 91786126
Following gene: 91786120
Centisome position: 4.52
GC content: 62.81
Gene sequence:
>675_bases TTGTTGGATAAGACATTCCCCCCCAAATCGGACAGCGTGATGGTGATTGGCCTGGGGCGCTTTGGCACCGGCGTGGCCCA GGCGTTGGTGACGCTGGGCCATGACGTGCTGGCCATTGACTCCAGCGCCGAGACCGTGCAACGCCTGGCCAGCACCCTGC CGCATGTGGTGCAGGCCGACGCCACTCACACGGAAACCCTCAAGCAACTGGGCGCACAGGACTTTGCCCATGCGGTGGTC AGCATCGGGTCTGATCTCGAAAGCAGCGTGCTCACGGTGCTCAACCTGAGCCAGATCGGCATCAAGGACATCTGGGCCAA GGCCAACAGCCAGCAACATGGGCGCATCGCCGAGCGGGTGGGCGCCCACCATGTGGTTTACCCCGAGGCCGACATGGGCG CCCGGGTGGCGCATCTGGTCACGGGGAAGATGATTGACTTCATTGAGTTTGATGACGGCTTTGCCATCGCCAAGACGCAT GCGCCTCGCGAAACCCATGACAAGCCCCTGTCGCAGTCGCAAGTCCGCTCCCGCCATGGCGTGACCATTGTGGGTATCAA GCGGCGGCACCAGGATTTCATCTACGCCAGACCCGAGACCGAGATCCAGCCCGGTGACCTGCTCATCGTGGCCGGCTCGA CTGACATGGTGGAGCGCTTTGCCGGACGCTTCTGA
Upstream 100 bases:
>100_bases GTCCTGATGTTCACCGGCCGGGTGGGCGTGGTTACCTTGGCCGCTTCCATGGCGATGAACCACGCGCGCCGCGATTTTCG ATACCCCGAGGAGAAACCCA
Downstream 100 bases:
>100_bases CAAGGGCATGATGATGGCGGGCCAGCCATTCATCAAATAAGTCGCAAACTACGCAGACCCCCAGTGCAGTGTTGCCTGCT TGATGGGACAACTCAAGCGA
Product: TrkA-N
Products: NA
Alternate protein names: K(+)-uptake protein ktrA [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF
Sequences:
>Translated_224_residues MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF >Mature_224_residues MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF
Specific function: Catalytic subunit of the ktrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and ktrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 24303; Mature: 24303
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQAD CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC ATHTETLKQLGAQDFAHAVVSIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERV CHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH GAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTHAPRETHDKPLSQSQVRSRHG CCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCC VTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF EEEEEEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC >Mature Secondary Structure MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQAD CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC ATHTETLKQLGAQDFAHAVVSIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERV CHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH GAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTHAPRETHDKPLSQSQVRSRHG CCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCC VTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF EEEEEEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 12086676 [H]