| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yvrE [H]
Identifier: 91786097
GI number: 91786097
Start: 204157
End: 205092
Strand: Direct
Name: yvrE [H]
Synonym: Bpro_0186
Alternate gene names: 91786097
Gene position: 204157-205092 (Clockwise)
Preceding gene: 91786096
Following gene: 91786098
Centisome position: 3.93
GC content: 67.52
Gene sequence:
>936_bases ATGACCTGGCAAACCCTTGTTGCACCGCTCAGCGAACTGGGGGAGTCCCCGTTCTGGCACCCGGAGGAGCAAAGCCTTTA CTGGGTGGACATTCCGGGGCGGCAGATTCACCGCTGCAAGGTGGGGGATGTGTCGAATGGCCCGGTGCAAAGCTGGGCCA TGCCGACCGAGCCGGGCAGCATTGCACCAGCCCGCACAGGTGGCCGGGCCAGCGGGCTCGTTATCGCGTTGCGTGACGGC ATTTATCGCGCCCGGCAGTGGGGAGGGGAATTGGAGCAACTGGTGCGGGCCGGGCACGACACCGCCACCACCCGCTTCAA CGATGGCAAGGCTGACCCCGTGGGCCGCTTCTGGGCTGGCACCATGTACGAGCCCCGCGACGCCAGGCAGGCACAACTTT TTTCCGTGGATTGCCGCGAGGGCCGCGCACCCCTGGTGGAACTCAAAGCAGGCGATGCCATCATTGCCAACGGGCTGGCC TGGTCGCCCGACGCTGCCACCGTCTATTGGACCGACACGCCCAGCCACACCATACGCGCCTGGGACTGGGACGGCCAGAG CAATGTCATGAGCCGGGGCCGCGTGTTCCGGCAATGGCCGGGAAAACCGGAGGGCTGGCAGCCCGGCATGCCCGGCTACG GCGGCCGGCCGGACGGTGCCGCTGTCGATGTGGAGGGCAACTACTACGTGGCCATGTTCGAAGGCGGCCGGCTTCTCAAG CTGTCACCGGCCGGCGAACTGCTGGCCGACATCGCCGTGCCGGCGCGCTGCCCCACCATGCCGTGCTTTGGCGGTGCCGA CCTGCGCACCCTGTACCTCACGACGGCCCGCTACAAGCGCCCGGACGAGGAGCTGCAAACCTGGCCGGACTCGGGCTGCG TGTTCTCGATGCGGGTCGACGTTCCCGGCCTGCCGGTGAACTTCTTCAGGGACTGA
Upstream 100 bases:
>100_bases GTTCATTGAGCGCTCCTGCGCATCGCCCCCTTCCGGGAAGCGAGGCGTTGGGGCAGTACTCACAGATGACACCGATGACA TTGACCAAGAGAAGGAAATC
Downstream 100 bases:
>100_bases AGGGCGGGTTCTGCGGTTGGGGTGGCGCCGGCCCGCAGGAAAAAATCGAACACAGCCCGTTCAAAAAAATCAAAACCCCC TGCGCTGGAGCCGCTTACCA
Product: gluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTWQTLVAPLSELGESPFWHPEEQSLYWVDIPGRQIHRCKVGDVSNGPVQSWAMPTEPGSIAPARTGGRASGLVIALRDG IYRARQWGGELEQLVRAGHDTATTRFNDGKADPVGRFWAGTMYEPRDARQAQLFSVDCREGRAPLVELKAGDAIIANGLA WSPDAATVYWTDTPSHTIRAWDWDGQSNVMSRGRVFRQWPGKPEGWQPGMPGYGGRPDGAAVDVEGNYYVAMFEGGRLLK LSPAGELLADIAVPARCPTMPCFGGADLRTLYLTTARYKRPDEELQTWPDSGCVFSMRVDVPGLPVNFFRD
Sequences:
>Translated_311_residues MTWQTLVAPLSELGESPFWHPEEQSLYWVDIPGRQIHRCKVGDVSNGPVQSWAMPTEPGSIAPARTGGRASGLVIALRDG IYRARQWGGELEQLVRAGHDTATTRFNDGKADPVGRFWAGTMYEPRDARQAQLFSVDCREGRAPLVELKAGDAIIANGLA WSPDAATVYWTDTPSHTIRAWDWDGQSNVMSRGRVFRQWPGKPEGWQPGMPGYGGRPDGAAVDVEGNYYVAMFEGGRLLK LSPAGELLADIAVPARCPTMPCFGGADLRTLYLTTARYKRPDEELQTWPDSGCVFSMRVDVPGLPVNFFRD >Mature_310_residues TWQTLVAPLSELGESPFWHPEEQSLYWVDIPGRQIHRCKVGDVSNGPVQSWAMPTEPGSIAPARTGGRASGLVIALRDGI YRARQWGGELEQLVRAGHDTATTRFNDGKADPVGRFWAGTMYEPRDARQAQLFSVDCREGRAPLVELKAGDAIIANGLAW SPDAATVYWTDTPSHTIRAWDWDGQSNVMSRGRVFRQWPGKPEGWQPGMPGYGGRPDGAAVDVEGNYYVAMFEGGRLLKL SPAGELLADIAVPARCPTMPCFGGADLRTLYLTTARYKRPDEELQTWPDSGCVFSMRVDVPGLPVNFFRD
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
Organism=Homo sapiens, GI23111021, Length=293, Percent_Identity=31.0580204778157, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI4759036, Length=293, Percent_Identity=31.0580204778157, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI24646912, Length=309, Percent_Identity=32.0388349514563, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24646910, Length=309, Percent_Identity=32.0388349514563, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI45551448, Length=309, Percent_Identity=29.7734627831715, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24641471, Length=293, Percent_Identity=30.0341296928328, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI18860103, Length=293, Percent_Identity=30.0341296928328, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI24641469, Length=293, Percent_Identity=30.0341296928328, Blast_Score=114, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 34297; Mature: 34166
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWQTLVAPLSELGESPFWHPEEQSLYWVDIPGRQIHRCKVGDVSNGPVQSWAMPTEPGS CCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC IAPARTGGRASGLVIALRDGIYRARQWGGELEQLVRAGHDTATTRFNDGKADPVGRFWAG CCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCC TMYEPRDARQAQLFSVDCREGRAPLVELKAGDAIIANGLAWSPDAATVYWTDTPSHTIRA CCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEECCEEECCCCCEEEECCCCCCEEEE WDWDGQSNVMSRGRVFRQWPGKPEGWQPGMPGYGGRPDGAAVDVEGNYYVAMFEGGRLLK EECCCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEE LSPAGELLADIAVPARCPTMPCFGGADLRTLYLTTARYKRPDEELQTWPDSGCVFSMRVD ECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHCCCCCCCEEEEEEC VPGLPVNFFRD CCCCCHHHCCC >Mature Secondary Structure TWQTLVAPLSELGESPFWHPEEQSLYWVDIPGRQIHRCKVGDVSNGPVQSWAMPTEPGS CHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC IAPARTGGRASGLVIALRDGIYRARQWGGELEQLVRAGHDTATTRFNDGKADPVGRFWAG CCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCC TMYEPRDARQAQLFSVDCREGRAPLVELKAGDAIIANGLAWSPDAATVYWTDTPSHTIRA CCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEECCEEECCCCCEEEECCCCCCEEEE WDWDGQSNVMSRGRVFRQWPGKPEGWQPGMPGYGGRPDGAAVDVEGNYYVAMFEGGRLLK EECCCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEE LSPAGELLADIAVPARCPTMPCFGGADLRTLYLTTARYKRPDEELQTWPDSGCVFSMRVD ECCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCHHHHHCCCCCCCEEEEEEC VPGLPVNFFRD CCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]