| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786084
Identifier: 91786084
GI number: 91786084
Start: 187851
End: 188486
Strand: Reverse
Name: 91786084
Synonym: Bpro_0173
Alternate gene names: NA
Gene position: 188486-187851 (Counterclockwise)
Preceding gene: 91786092
Following gene: 91786082
Centisome position: 3.62
GC content: 63.05
Gene sequence:
>636_bases ATGCTTTGCAACAAATCCGGAAAATCCATGTTCGAATACCTGTTTGGCGACAAGAAAAAGTTGGCGCCCGGTCCCCCTGA GCTGATGCGGCCGGAAGAGCGCAGGCGTGCGATTGAAGGCTCCAGCACGGCCGAACTGGCGGCCAGGCTGCTGATTGCGC CCACGGCCCTGATGCAGCTCACGCCCGAAGAGGCGCTCACCGTGGTGAGCTACATGATTCCGCAAAAAATTGCCGCGGGC ACCACCTTCATCACCGAAGGGGACAAAAGCGATACCGGCTACATGCTGCTGGTGGTCGAAGGCGAGGTCACCGTGGAAAG CATCCTGGTCAGTCGCCGCACACCCGTCACCGTGTCGGTGCTGGGACCGGGCAGCCTGGTCGGCGAAATGGGGCTGGTCG ATGGCCGGGCCCGGCTGGCCTCCTGCACGGCCAGCACCGACGTGCGGTGCGCGGTGTTGTCACGCGCCGCACTCGGAACT CTCAGCGTGGATGATCCCCGGACGGCGGCCAAGCTGATGTTCGCCGTCTCGCTGCGGATTGCCGAGCGGCTGCGCGATGC CACCGAAAAACTCAAGAAATACAGCCAGCTCACGCAGGCCATGCAGCAGGAAATCGATCACCTGCTGCCGGACTGA
Upstream 100 bases:
>100_bases CTTCGGGGAACACGCCGGTGACCCAAGCCTGACGAATCAATGCTTCGCTGCAACGCTCCTTGGGTTACCATTATTTTAAG GGCAGGCAGCGGCCGGCGCC
Downstream 100 bases:
>100_bases CGCCTCACGCGAATAAAAAAGCGCGGTGCCCGCCAACCCGGCCTGACCCGCGATCTAACCCGGCCTAAGCCGCCTCACGG TAGAAGAAGCGGGAAGCGAC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLCNKSGKSMFEYLFGDKKKLAPGPPELMRPEERRRAIEGSSTAELAARLLIAPTALMQLTPEEALTVVSYMIPQKIAAG TTFITEGDKSDTGYMLLVVEGEVTVESILVSRRTPVTVSVLGPGSLVGEMGLVDGRARLASCTASTDVRCAVLSRAALGT LSVDDPRTAAKLMFAVSLRIAERLRDATEKLKKYSQLTQAMQQEIDHLLPD
Sequences:
>Translated_211_residues MLCNKSGKSMFEYLFGDKKKLAPGPPELMRPEERRRAIEGSSTAELAARLLIAPTALMQLTPEEALTVVSYMIPQKIAAG TTFITEGDKSDTGYMLLVVEGEVTVESILVSRRTPVTVSVLGPGSLVGEMGLVDGRARLASCTASTDVRCAVLSRAALGT LSVDDPRTAAKLMFAVSLRIAERLRDATEKLKKYSQLTQAMQQEIDHLLPD >Mature_211_residues MLCNKSGKSMFEYLFGDKKKLAPGPPELMRPEERRRAIEGSSTAELAARLLIAPTALMQLTPEEALTVVSYMIPQKIAAG TTFITEGDKSDTGYMLLVVEGEVTVESILVSRRTPVTVSVLGPGSLVGEMGLVDGRARLASCTASTDVRCAVLSRAALGT LSVDDPRTAAKLMFAVSLRIAERLRDATEKLKKYSQLTQAMQQEIDHLLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22829; Mature: 22829
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCNKSGKSMFEYLFGDKKKLAPGPPELMRPEERRRAIEGSSTAELAARLLIAPTALMQL CCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHC TPEEALTVVSYMIPQKIAAGTTFITEGDKSDTGYMLLVVEGEVTVESILVSRRTPVTVSV CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEE LGPGSLVGEMGLVDGRARLASCTASTDVRCAVLSRAALGTLSVDDPRTAAKLMFAVSLRI ECCCHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AERLRDATEKLKKYSQLTQAMQQEIDHLLPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLCNKSGKSMFEYLFGDKKKLAPGPPELMRPEERRRAIEGSSTAELAARLLIAPTALMQL CCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHC TPEEALTVVSYMIPQKIAAGTTFITEGDKSDTGYMLLVVEGEVTVESILVSRRTPVTVSV CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEE LGPGSLVGEMGLVDGRARLASCTASTDVRCAVLSRAALGTLSVDDPRTAAKLMFAVSLRI ECCCHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AERLRDATEKLKKYSQLTQAMQQEIDHLLPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA