The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is bphB [H]

Identifier: 91786065

GI number: 91786065

Start: 163950

End: 166487

Strand: Direct

Name: bphB [H]

Synonym: Bpro_0154

Alternate gene names: 91786065

Gene position: 163950-166487 (Clockwise)

Preceding gene: 91786064

Following gene: 91786067

Centisome position: 3.15

GC content: 65.92

Gene sequence:

>2538_bases
ATGGCGGGGCTGGCACTGGCGGTGGGGCTGGTGTTCACCGGGCTGGGCGCGTTCTGGGTGCATGACAGCATCCAGGCCGA
AGCCAGGGCGCGCTTTGGTCGCCAGGTGGACCGTCTCCAGTCCGATGTGGAAAATCGCCTGAACGCGCCCTTGGTGGGCC
TGCGGGGCGCCGCCGGTGTCTATGCGGCCAGCCATTCGGTAGAGCGTGCTGAATTCCGTGCCTACGTGGAGTCCCTGCAG
CTGCAGCGCGATTTCCCCGGTGTGCGCGGCTACGGCTTCCTGGCATGGATGCTGCGTGATGACCTGGGCCGCTTCGTCAG
CGCGGAACGGGGCGATGGCGCACCCGCCTTTTCTGTCAATGCGGCCGGCAGTGCACCCGACCTTTACGTGGTGAAATACA
TCGAGCCGGAGGCCGACAACCACCCCTTGCTCGGTGAGGACCTGGGCGCCGACGCTGTGCGTCGCGAAGCCATCGAAGGA
GCCCTCGCCACCGGCATGCCGACACTGAGCAAAGCGGTCATGTTGTCGGGAGCGTCCCGGCAGGAGCGCGGGTTTGTCTA
CCTGCTGCCGGTTTTCCGCACCGGCACCGACCCCTCCACGCCGGCGCAACGCCGCGCGGCCCTGGTGGGGTTGCTGTTTG
CGCCTCTGGCGGTGGGCGAGGTCATGAGTGGTGCGGTTGCGGCTGTGCAGGGGCAGGCGGACTTCGAACTCTTTGACGGT
GCCAGGGCCACGGCGGATCAGCTGATTTATGACTTTGACGGGCACCTGGCCGCCGTCAGGGGCGAGATTGGCCCGGCGCA
CTATGCCGACCGCCTGCTTCACGCGTCACGTGCCATTTCAGCCGGTGGGCGCACCCTCACGCTGCATGTCAGCTCGACAG
CCGCTTTCGAGGCGCAAGCCGCGAGCCCCTTGCCGGCCCTGCTGGGCCTGGGCGGCGCAGCGCTGAGCCTGTTGCTGGCG
ATCTGCATCTGGCTGCTTGGCAGCAGCCGGGCGCGAGCCCTGGCTGCGGCCCAGCGCATGACCCTCAGCCTGGCCCATGA
GCAGCAGCGTCTGCTCAGCATGGTGGAAGGTACCAATGTCGGAACCTGGGAGTGGAATGTGCAGACCGGCGAGATCCGCC
TGGACGAGCGCTGGGCCGGAATCATCGGCTACACGCTGGGCGAGTTGCAACCGGTCAGCATCCAGACCTGGCGCGGCCAG
TCGCACCCCGATGACCTGGCACGTTCCGATGCGTTGCTGGAGCAGCATTTTGCCGGGCAGACCTCCTACTATGACTTCGA
GGCGCGCATGCGCCACAAGGATGGCCGCTGGGTCTGGGTGTTGGTGCGGGGCCGGGTCTCGGCGTGGACCGATCGCCGCA
GGCCCGCCCTGATGGCGGGCACCCTGATGGACATCACCGAGCGCCAGATGGCCCAGCTGGCTCTGCGCAACAGCGAGGAA
CATTTCCGTCAGCTCTATGAGACCAGCCTGGACGGCATTTTGCAGACCCGGCCCGATGGACAGGTGCTGCATGCCAACCC
GGCCGCCTGCGAGCTGTTTGGCATGAGCCTGGACGAACTGCGGCAGCGTGGCCGGCACGGCCTGGTCGACCCCGGCGACG
CGCGCCTGGAGCCGTTGCTGGAGGAGCGCCAGCGCGAAGGCAAAGCTTACGGCGAACTCCGGATGCTGCGCAGTGACGGT
TCCTATTTCGAGTGCGAACTGTCATCATCGATGTACCTCGACCAGGGCAATCAGGCCTGCGCCAACATTGTTTTGCGCGA
CATCACCGTGCGCAAGCGCTCGGAGGCGCGCATCACGGAACTCAATACCGAGCTGGAGCAGCGGGTCAAGCGGCGTACCG
CGCAGCTGGAAGCGTCCAACCGGGATTTGCAGGAGTTTGCCCATTCGGTGGCGCATGACCTGCGCCAGCCCATCATTGCC
ATTGGCGGCTTCAGCGGTTTGCTCGAACGCATGGTGACAGACCCGCATGGCAAACATTACCTCGCGCGCATCAAGGCTGG
CGTCCAGCAGGCGGGTGAGTTGACCGAGGCCCTGCTCGCGCTGGCCAACCTGTCGCGCGTGCAGTTGCGTCCGCAGGCGG
TGGACCTCAGCGCCATTGCGCGCAGCGTGATGGACAACCTGCAGCAGCAAGACAGCAGACGCGTGGCCAGCATCTGCATC
GAGGGCAACCTGGTGGTGCAGGCCGATCCCATGCTGCTCCGGCTGGTCATGGAAGAGCTGTTGGGCAACGCCTGGAAATT
CACCTCGCGGCAGAGCTGCACCGAAATCAGCTTTGGCGTGCGCGAGGTGGCGGTGGGTGAGGTCGCCCAGACCGTCTATG
AGGTCAGGGACAACGGGGTCGGTTTCGAGATGGCACACGCCGGCAAGCTGTTTCGCAGCTTCCAGCGCCTGCACTCGCAG
GTGGATTTTCCCGGTGTGGGGGTGGGCCTGGCCAACATCCGCAGAATCATCGTGCGCCATGGCGGGCAAATCTGGGCCCA
GTCGGCCATTGGCCAGGGTGCCAGCTTCTGTTTCACGCTCGCATATCCCCGGCCTTGA

Upstream 100 bases:

>100_bases
CCCATGTGCCTCTTTCGCGACCGGTTGTCGTCCTGCCATGAGCCGGCAGGTAGTGCCCGCTGAACCGCCCTCCATCAACC
GCCAGCGCGCTGCCGCGGGC

Downstream 100 bases:

>100_bases
GCGGGCTGGGGATGCCGGCTTGAAGTGCTATCAATTGTGTAGCTTTCAATCCTTGGAAAAAGAGGGCGGTCCAATTTCGA
TCAGCAAATCGGGCTTGAAC

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 845; Mature: 844

Protein sequence:

>845_residues
MAGLALAVGLVFTGLGAFWVHDSIQAEARARFGRQVDRLQSDVENRLNAPLVGLRGAAGVYAASHSVERAEFRAYVESLQ
LQRDFPGVRGYGFLAWMLRDDLGRFVSAERGDGAPAFSVNAAGSAPDLYVVKYIEPEADNHPLLGEDLGADAVRREAIEG
ALATGMPTLSKAVMLSGASRQERGFVYLLPVFRTGTDPSTPAQRRAALVGLLFAPLAVGEVMSGAVAAVQGQADFELFDG
ARATADQLIYDFDGHLAAVRGEIGPAHYADRLLHASRAISAGGRTLTLHVSSTAAFEAQAASPLPALLGLGGAALSLLLA
ICIWLLGSSRARALAAAQRMTLSLAHEQQRLLSMVEGTNVGTWEWNVQTGEIRLDERWAGIIGYTLGELQPVSIQTWRGQ
SHPDDLARSDALLEQHFAGQTSYYDFEARMRHKDGRWVWVLVRGRVSAWTDRRRPALMAGTLMDITERQMAQLALRNSEE
HFRQLYETSLDGILQTRPDGQVLHANPAACELFGMSLDELRQRGRHGLVDPGDARLEPLLEERQREGKAYGELRMLRSDG
SYFECELSSSMYLDQGNQACANIVLRDITVRKRSEARITELNTELEQRVKRRTAQLEASNRDLQEFAHSVAHDLRQPIIA
IGGFSGLLERMVTDPHGKHYLARIKAGVQQAGELTEALLALANLSRVQLRPQAVDLSAIARSVMDNLQQQDSRRVASICI
EGNLVVQADPMLLRLVMEELLGNAWKFTSRQSCTEISFGVREVAVGEVAQTVYEVRDNGVGFEMAHAGKLFRSFQRLHSQ
VDFPGVGVGLANIRRIIVRHGGQIWAQSAIGQGASFCFTLAYPRP

Sequences:

>Translated_845_residues
MAGLALAVGLVFTGLGAFWVHDSIQAEARARFGRQVDRLQSDVENRLNAPLVGLRGAAGVYAASHSVERAEFRAYVESLQ
LQRDFPGVRGYGFLAWMLRDDLGRFVSAERGDGAPAFSVNAAGSAPDLYVVKYIEPEADNHPLLGEDLGADAVRREAIEG
ALATGMPTLSKAVMLSGASRQERGFVYLLPVFRTGTDPSTPAQRRAALVGLLFAPLAVGEVMSGAVAAVQGQADFELFDG
ARATADQLIYDFDGHLAAVRGEIGPAHYADRLLHASRAISAGGRTLTLHVSSTAAFEAQAASPLPALLGLGGAALSLLLA
ICIWLLGSSRARALAAAQRMTLSLAHEQQRLLSMVEGTNVGTWEWNVQTGEIRLDERWAGIIGYTLGELQPVSIQTWRGQ
SHPDDLARSDALLEQHFAGQTSYYDFEARMRHKDGRWVWVLVRGRVSAWTDRRRPALMAGTLMDITERQMAQLALRNSEE
HFRQLYETSLDGILQTRPDGQVLHANPAACELFGMSLDELRQRGRHGLVDPGDARLEPLLEERQREGKAYGELRMLRSDG
SYFECELSSSMYLDQGNQACANIVLRDITVRKRSEARITELNTELEQRVKRRTAQLEASNRDLQEFAHSVAHDLRQPIIA
IGGFSGLLERMVTDPHGKHYLARIKAGVQQAGELTEALLALANLSRVQLRPQAVDLSAIARSVMDNLQQQDSRRVASICI
EGNLVVQADPMLLRLVMEELLGNAWKFTSRQSCTEISFGVREVAVGEVAQTVYEVRDNGVGFEMAHAGKLFRSFQRLHSQ
VDFPGVGVGLANIRRIIVRHGGQIWAQSAIGQGASFCFTLAYPRP
>Mature_844_residues
AGLALAVGLVFTGLGAFWVHDSIQAEARARFGRQVDRLQSDVENRLNAPLVGLRGAAGVYAASHSVERAEFRAYVESLQL
QRDFPGVRGYGFLAWMLRDDLGRFVSAERGDGAPAFSVNAAGSAPDLYVVKYIEPEADNHPLLGEDLGADAVRREAIEGA
LATGMPTLSKAVMLSGASRQERGFVYLLPVFRTGTDPSTPAQRRAALVGLLFAPLAVGEVMSGAVAAVQGQADFELFDGA
RATADQLIYDFDGHLAAVRGEIGPAHYADRLLHASRAISAGGRTLTLHVSSTAAFEAQAASPLPALLGLGGAALSLLLAI
CIWLLGSSRARALAAAQRMTLSLAHEQQRLLSMVEGTNVGTWEWNVQTGEIRLDERWAGIIGYTLGELQPVSIQTWRGQS
HPDDLARSDALLEQHFAGQTSYYDFEARMRHKDGRWVWVLVRGRVSAWTDRRRPALMAGTLMDITERQMAQLALRNSEEH
FRQLYETSLDGILQTRPDGQVLHANPAACELFGMSLDELRQRGRHGLVDPGDARLEPLLEERQREGKAYGELRMLRSDGS
YFECELSSSMYLDQGNQACANIVLRDITVRKRSEARITELNTELEQRVKRRTAQLEASNRDLQEFAHSVAHDLRQPIIAI
GGFSGLLERMVTDPHGKHYLARIKAGVQQAGELTEALLALANLSRVQLRPQAVDLSAIARSVMDNLQQQDSRRVASICIE
GNLVVQADPMLLRLVMEELLGNAWKFTSRQSCTEISFGVREVAVGEVAQTVYEVRDNGVGFEMAHAGKLFRSFQRLHSQV
DFPGVGVGLANIRRIIVRHGGQIWAQSAIGQGASFCFTLAYPRP

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=396, Percent_Identity=24.7474747474747, Blast_Score=84, Evalue=5e-17,
Organism=Escherichia coli, GI1788549, Length=371, Percent_Identity=25.6064690026954, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789149, Length=304, Percent_Identity=22.6973684210526, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786912, Length=217, Percent_Identity=28.110599078341, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 92600; Mature: 92469

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLALAVGLVFTGLGAFWVHDSIQAEARARFGRQVDRLQSDVENRLNAPLVGLRGAAGV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
YAASHSVERAEFRAYVESLQLQRDFPGVRGYGFLAWMLRDDLGRFVSAERGDGAPAFSVN
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
AAGSAPDLYVVKYIEPEADNHPLLGEDLGADAVRREAIEGALATGMPTLSKAVMLSGASR
CCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
QERGFVYLLPVFRTGTDPSTPAQRRAALVGLLFAPLAVGEVMSGAVAAVQGQADFELFDG
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCHHHHCC
ARATADQLIYDFDGHLAAVRGEIGPAHYADRLLHASRAISAGGRTLTLHVSSTAAFEAQA
CHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCC
ASPLPALLGLGGAALSLLLAICIWLLGSSRARALAAAQRMTLSLAHEQQRLLSMVEGTNV
CCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTWEWNVQTGEIRLDERWAGIIGYTLGELQPVSIQTWRGQSHPDDLARSDALLEQHFAGQ
CEEEEEEEECCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
TSYYDFEARMRHKDGRWVWVLVRGRVSAWTDRRRPALMAGTLMDITERQMAQLALRNSEE
CCEEEHHHHHHCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
HFRQLYETSLDGILQTRPDGQVLHANPAACELFGMSLDELRQRGRHGLVDPGDARLEPLL
HHHHHHHHHHHHHEECCCCCCEEECCCCHHHEECCCHHHHHHCCCCCCCCCCHHHHHHHH
EERQREGKAYGELRMLRSDGSYFECELSSSMYLDQGNQACANIVLRDITVRKRSEARITE
HHHHHCCCHHHHHEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
LNTELEQRVKRRTAQLEASNRDLQEFAHSVAHDLRQPIIAIGGFSGLLERMVTDPHGKHY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHH
LARIKAGVQQAGELTEALLALANLSRVQLRPQAVDLSAIARSVMDNLQQQDSRRVASICI
HHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
EGNLVVQADPMLLRLVMEELLGNAWKFTSRQSCTEISFGVREVAVGEVAQTVYEVRDNGV
ECCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GFEMAHAGKLFRSFQRLHSQVDFPGVGVGLANIRRIIVRHGGQIWAQSAIGQGASFCFTL
CEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEE
AYPRP
CCCCC
>Mature Secondary Structure 
AGLALAVGLVFTGLGAFWVHDSIQAEARARFGRQVDRLQSDVENRLNAPLVGLRGAAGV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
YAASHSVERAEFRAYVESLQLQRDFPGVRGYGFLAWMLRDDLGRFVSAERGDGAPAFSVN
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
AAGSAPDLYVVKYIEPEADNHPLLGEDLGADAVRREAIEGALATGMPTLSKAVMLSGASR
CCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
QERGFVYLLPVFRTGTDPSTPAQRRAALVGLLFAPLAVGEVMSGAVAAVQGQADFELFDG
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCHHHHCC
ARATADQLIYDFDGHLAAVRGEIGPAHYADRLLHASRAISAGGRTLTLHVSSTAAFEAQA
CHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCC
ASPLPALLGLGGAALSLLLAICIWLLGSSRARALAAAQRMTLSLAHEQQRLLSMVEGTNV
CCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTWEWNVQTGEIRLDERWAGIIGYTLGELQPVSIQTWRGQSHPDDLARSDALLEQHFAGQ
CEEEEEEEECCEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
TSYYDFEARMRHKDGRWVWVLVRGRVSAWTDRRRPALMAGTLMDITERQMAQLALRNSEE
CCEEEHHHHHHCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
HFRQLYETSLDGILQTRPDGQVLHANPAACELFGMSLDELRQRGRHGLVDPGDARLEPLL
HHHHHHHHHHHHHEECCCCCCEEECCCCHHHEECCCHHHHHHCCCCCCCCCCHHHHHHHH
EERQREGKAYGELRMLRSDGSYFECELSSSMYLDQGNQACANIVLRDITVRKRSEARITE
HHHHHCCCHHHHHEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
LNTELEQRVKRRTAQLEASNRDLQEFAHSVAHDLRQPIIAIGGFSGLLERMVTDPHGKHY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHH
LARIKAGVQQAGELTEALLALANLSRVQLRPQAVDLSAIARSVMDNLQQQDSRRVASICI
HHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
EGNLVVQADPMLLRLVMEELLGNAWKFTSRQSCTEISFGVREVAVGEVAQTVYEVRDNGV
ECCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GFEMAHAGKLFRSFQRLHSQVDFPGVGVGLANIRRIIVRHGGQIWAQSAIGQGASFCFTL
CEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEE
AYPRP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]