| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786036
Identifier: 91786036
GI number: 91786036
Start: 127446
End: 128420
Strand: Direct
Name: 91786036
Synonym: Bpro_0125
Alternate gene names: NA
Gene position: 127446-128420 (Clockwise)
Preceding gene: 91786035
Following gene: 91786039
Centisome position: 2.45
GC content: 67.79
Gene sequence:
>975_bases GTGAGCGGCGGTCCCATCAAGGCCCATGCGGTGCAACTGGAGCCGCCCGGGCTGTCCGGCTGGGCGGCTTCTCCCACAGG TACGGCCTATGTGCACGAGCGTGCCTCGGTCGAGGCCGGCCCGGAAGTCCTGCTGACGGCGCTGGTGCACGGCAACGAGT ACTCGGGTGCGTGGGCGCTGGATGCGTTCCTGCGCAGCGGACTGCACCCCCGGCGGGGGCGTATCACTGCTGCGTTCTGC AACACGGCGGCCTTCGCACGCTTTGAGGCCCGCCATCCGGACGCATCCCGGTTTGTCGACGAGGACTTCAACCGCGTGTG GTCCGCAAGCGTGCTGGATGGCAGCAGACACAGCGCCGAATTGTCACGTGCCCGCGAAATCCGACCCTTCGTCGACCGCG CCAGCCATTTGCTGGACCTGCATTCGATGCATGAGCCCTGCGGGCCTCTTCTGGTCACCGGCCTGCTGCCACGCAACATC GCTTTCGCGCAAAGCCTGGGTACGGCGAGCCAGGTGGTCGTGGATGCCGGTCACGCCGATGGCGTGCGCATGCGGGACTA CGGGCCGTTTGCGGAAAAAGAGGGCTCCCGCATTGCCCTGCTGCTGGAAGCCGGGCAGCACTGGGAGCTGGCGTCGCTGC AGGCGGCGCGCAATGTGCTGATGCGTTTTCTGGTGGGCTGCGGGGTCATGGATCATGGCGACGTGCCGCCTGGCTGGCTG CTGCCCGACGCGATGCCGCCACCGCCGGTGATGGTCACCCACCGCATCGTCGCGCGCTCGGCCGATTTTGCGTTTGTGCA GGACTTTCGTGGCGGCGAAATCATTCGCCGCGCCGGCACACCGATTGCGCACGATGCCGGCGAGGCGGTGGTGACGCCTT ATGACGACTGCGTGCTGGTCATGCCATCGGTGCGGCAGTTGCGGCCCGGTGTGACCACCGTGCGCCTGGGGCAGCGGGGC GACGGGATGGTGTAG
Upstream 100 bases:
>100_bases ACGAAGGAGGCACGCCGCAGGCGCTCACGGCCTTTATCCGGGCGGAAACCCAGCGCGTGCGCAGTGTGGTCAACAAGGCC GTGGCGACCGGCGCGGCCTC
Downstream 100 bases:
>100_bases CGGGGGCGGCCAGGTCGCGTAGAACCCGGATGGATACTTCAGTCACGGACAGTCGTCGCGCCCTGCGCCTGTCGGCCAGG CAAGGCGCGCCGGATTCACC
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Succinylglutamate Desuccinylase/Aspartoacylase Family; Aspartoacylase
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFC NTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNI AFAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRG DGMV
Sequences:
>Translated_324_residues MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFC NTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNI AFAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRG DGMV >Mature_323_residues SGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFCN TAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIA FAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWLL PDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRGD GMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34921; Mature: 34790
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWAL CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEHHHCCCCCCCHHHH DAFLRSGLHPRRGRITAAFCNTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAE HHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH LSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIAFAQSLGTASQVVVDAGHAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC GVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLV CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCCCEEEE MPSVRQLRPGVTTVRLGQRGDGMV CCCHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure SGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWAL CCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEHHHCCCCCCCHHHH DAFLRSGLHPRRGRITAAFCNTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAE HHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH LSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIAFAQSLGTASQVVVDAGHAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC GVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLV CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCCCEEEE MPSVRQLRPGVTTVRLGQRGDGMV CCCHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA