Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yvqK [H]

Identifier: 91786024

GI number: 91786024

Start: 115324

End: 115893

Strand: Direct

Name: yvqK [H]

Synonym: Bpro_0113

Alternate gene names: 91786024

Gene position: 115324-115893 (Clockwise)

Preceding gene: 91786012

Following gene: 91786026

Centisome position: 2.22

GC content: 66.49

Gene sequence:

>570_bases
ATGGCCAACAGACTTTCACAGATCGCAACACGCACGGGCGACAACGGCACCACGGGGCTGGGCGACAACACGCGCGTCTC
CAAAGACAGCCTGCGTGTTCATGCCATGGGCGACGTCGATGAATTGAATTCGCAGATCGGCGTGCTGCTCTGCGAAGAAA
TGCCGCCCGGCGTGCGCGACCTGCTGGTCGAAGTGCAGCACCAGCTGTTCAACCTCGGCGGCGAGCTGTCGATCCCGGGC
TTTGAGCTCCTCAAGCCCGAGGCCGTGGCCCTGCTCGATGCGGCGCTGGCCGAGCACAATGCCCAACTGCCGCGCCTGGC
GGAATTCATTTTGCCGGCCGGCTCGCGGGCCGCGGCGCTCGCGCATGTGTGCCGCACCGTGGCGCGCCGCGCGGAGCGGG
CGGTGGTGGCCCTGGGCGCGGCCGAGCCCCTCAAGGAGGCGCCGCGTCAGTACCTCAACCGTTTGAGCGACCTGCTGTTT
GTGCTGTCACGCGTGCTCAACCGCATGAATGGCGGTGACGATGTGTACTGGAAAAGCGAACGCATGGCGAGGGCGGCCTC
GGAGGAGTGA

Upstream 100 bases:

>100_bases
TGACATGGTGGCGGACCACGACACATTTGCTTGCCTCGCGTAACGCCGCGCGAGGCTTCACCGGTTTCACGGCGCCTCAC
CCCCTTCACACCTCACCCAT

Downstream 100 bases:

>100_bases
GCGCATCTTAAAGCCGGCAGCGTCGAGCCTGGATATCACGACTGCTTCGGCTGCAGCATCGCCATGGTGATGCGCGACAC
GCAGGTCAGCTCGCCCGCGT

Product: ATP:cob(I)alamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MANRLSQIATRTGDNGTTGLGDNTRVSKDSLRVHAMGDVDELNSQIGVLLCEEMPPGVRDLLVEVQHQLFNLGGELSIPG
FELLKPEAVALLDAALAEHNAQLPRLAEFILPAGSRAAALAHVCRTVARRAERAVVALGAAEPLKEAPRQYLNRLSDLLF
VLSRVLNRMNGGDDVYWKSERMARAASEE

Sequences:

>Translated_189_residues
MANRLSQIATRTGDNGTTGLGDNTRVSKDSLRVHAMGDVDELNSQIGVLLCEEMPPGVRDLLVEVQHQLFNLGGELSIPG
FELLKPEAVALLDAALAEHNAQLPRLAEFILPAGSRAAALAHVCRTVARRAERAVVALGAAEPLKEAPRQYLNRLSDLLF
VLSRVLNRMNGGDDVYWKSERMARAASEE
>Mature_188_residues
ANRLSQIATRTGDNGTTGLGDNTRVSKDSLRVHAMGDVDELNSQIGVLLCEEMPPGVRDLLVEVQHQLFNLGGELSIPGF
ELLKPEAVALLDAALAEHNAQLPRLAEFILPAGSRAAALAHVCRTVARRAERAVVALGAAEPLKEAPRQYLNRLSDLLFV
LSRVLNRMNGGDDVYWKSERMARAASEE

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=194, Percent_Identity=32.4742268041237, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115534154, Length=170, Percent_Identity=32.3529411764706, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20520; Mature: 20389

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRLSQIATRTGDNGTTGLGDNTRVSKDSLRVHAMGDVDELNSQIGVLLCEEMPPGVRD
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHEEEECCCCCCHHH
LLVEVQHQLFNLGGELSIPGFELLKPEAVALLDAALAEHNAQLPRLAEFILPAGSRAAAL
HHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AHVCRTVARRAERAVVALGAAEPLKEAPRQYLNRLSDLLFVLSRVLNRMNGGDDVYWKSE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHH
RMARAASEE
HHHHHCCCC
>Mature Secondary Structure 
ANRLSQIATRTGDNGTTGLGDNTRVSKDSLRVHAMGDVDELNSQIGVLLCEEMPPGVRD
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHEEEECCCCCCHHH
LLVEVQHQLFNLGGELSIPGFELLKPEAVALLDAALAEHNAQLPRLAEFILPAGSRAAAL
HHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AHVCRTVARRAERAVVALGAAEPLKEAPRQYLNRLSDLLFVLSRVLNRMNGGDDVYWKSE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHH
RMARAASEE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]