| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786019
Identifier: 91786019
GI number: 91786019
Start: 109745
End: 110344
Strand: Reverse
Name: 91786019
Synonym: Bpro_0107
Alternate gene names: NA
Gene position: 110344-109745 (Counterclockwise)
Preceding gene: 91786020
Following gene: 91786018
Centisome position: 2.12
GC content: 65.17
Gene sequence:
>600_bases ATGATGCTCATCATGCAAAATAGGAAGCCTAACGCCAGAGCTGCGGCTAAGGATGCCACGCACGAACGCATCGTGGCCGT GGCCGCCCGAGCAATCCGTCGTAGCGGCTACGACGGTACTGGAGTCGCCGACATCATGAAGGAGGCCGGCCTGACGCATG GCGCCTTTTATGCCCACTTCACGTCACGCGAGGCCATGTTGGCCGAAGCGGCGGGGAGGGCGTGCGCGGAGTCAGCCGCC GTAGTGGCGGAGGTTGTTGCCAGCGTGCCCTCCGAGCAGGCTTTTGCATCCATGCTTCGCACTTACCTCTCGCGGGAGCA CCTGGAGCAGGTAGAAATGGGATGTCCCCTGGCCGCGCTGGGCTCGGAGACGCCGCGCCAGGCCCCCGAAGTACGCCGAG TGACCACCCGGCACATCAAGGAAATGATCGATCTTGTCGCCCGTCAGTCGCCTGACTGGGGGCAGCCCGGTGCCCACGAA CGCGCACTCGTGACCGTCGCCACCATGGTGGGCACATTGCTGTTAGCGCGTGCAGTCGACGAGCCCGCGCTATCGGACAG CCTGTGCGCGGCCGCATTGAAGCACCTGCCCCCCGCCTGA
Upstream 100 bases:
>100_bases TTGAACACTTGCGCATAGGTCGTGGCCGTGGTCGGGATGGATCCCCGGTGATCGACCTTGCCCCAAAAACGCCGCAGTGC GCACTGCTGGAAATTATTGT
Downstream 100 bases:
>100_bases ATCCACTGAGACACTCGCCTTTTCGCTCGCCTAAACATATGATGATCATCATGCGAAATCAATATAACGCCTGTCAGGCG AGCCCTTCTGTTCGGCAATG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Regulatory Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA
Sequences:
>Translated_199_residues MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA >Mature_199_residues MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21251; Mature: 21251
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHF CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHH TSREAMLAEAAGRACAESAAVVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHERALVTVATMVGTLLLARAVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC EPALSDSLCAAALKHLPPA CCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHF CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHH TSREAMLAEAAGRACAESAAVVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHERALVTVATMVGTLLLARAVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC EPALSDSLCAAALKHLPPA CCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA