| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabG [H]
Identifier: 91786013
GI number: 91786013
Start: 104975
End: 105679
Strand: Reverse
Name: fabG [H]
Synonym: Bpro_0101
Alternate gene names: 91786013
Gene position: 105679-104975 (Counterclockwise)
Preceding gene: 91786014
Following gene: 91786010
Centisome position: 2.03
GC content: 63.4
Gene sequence:
>705_bases ATGAAAATCGAGAATTCTGTTGTCCTCGTCACCGGTGCCAATCGCGGCATCGGCCAGGCGTTCTCTCGCGAGTTGCTCGC CCGCGGTGCCCGCAAGGTCTACGCTGGCGCGCGCGATCCTGCGACCGTCACCCAATCCGGTGTTCAGGCCCTGCGACTCG ACGTCACCAAGCCGGCAGACGTGGCCGCCGCCGCAGCGCTGGCGTCGGATGTCACGCTGATCATCAACAACGCCGGCATT GCCCAGCCTGGAGGCTTTCTCGCAGCGGACAGCGAAGACGTCGCACGGCGCATCTTCGAGACCAACTTTTTCGCCATGTT GCGCATGAGCAAGGCCTTTGCGCCCATTCTCAAGGCCAACGGCGGTGGCGCGTTGCTCAATGTGTTGTCGGTCGCTTCAT GGGTGAACGGCGGCGAGCTGGCCGCCTATTCGGCCAGCAAGTCCGCAGCTTGGTCTCTCACCAATGCCCTGCGCAACGAA CTGGCGACGCAGAAGACGCAGGTGCTGGCACTGCACATGGCCTACGTCGATACCGATCTCACGCACGGGTTCGATGTCCC GAAGTCCAGCCCTGAGGAGATCGTCAAGCGCGCGCTCGACGGACTCGAATCGGGCCTTGATGAAGTGCTGGCCGATGAGC TCACCCTGCAAGTCAAGCGCGGGATGACGGTGGCCAGGCCCAGCTACCTACCGCAGGCCTCCTGA
Upstream 100 bases:
>100_bases AGGTCGTCGTCAAGATCAAGTGAGTTTGTTCATGTCAGTGTTGCTGGAAAACCTGAAAGCCGGCCGCTGAATCTGTTTGT CCCCCACTTTGGAGATTCCT
Downstream 100 bases:
>100_bases GGCCTGAATTCGATCGTCAGCCCCGCCCTCTGCCAACGACAAAGTCTCGAACGACCTGCATTCACTCAAGGGGCATCATG CTTTTCGCCCCTCTCGTCGC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKIENSVVLVTGANRGIGQAFSRELLARGARKVYAGARDPATVTQSGVQALRLDVTKPADVAAAAALASDVTLIINNAGI AQPGGFLAADSEDVARRIFETNFFAMLRMSKAFAPILKANGGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRNE LATQKTQVLALHMAYVDTDLTHGFDVPKSSPEEIVKRALDGLESGLDEVLADELTLQVKRGMTVARPSYLPQAS
Sequences:
>Translated_234_residues MKIENSVVLVTGANRGIGQAFSRELLARGARKVYAGARDPATVTQSGVQALRLDVTKPADVAAAAALASDVTLIINNAGI AQPGGFLAADSEDVARRIFETNFFAMLRMSKAFAPILKANGGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRNE LATQKTQVLALHMAYVDTDLTHGFDVPKSSPEEIVKRALDGLESGLDEVLADELTLQVKRGMTVARPSYLPQAS >Mature_234_residues MKIENSVVLVTGANRGIGQAFSRELLARGARKVYAGARDPATVTQSGVQALRLDVTKPADVAAAAALASDVTLIINNAGI AQPGGFLAADSEDVARRIFETNFFAMLRMSKAFAPILKANGGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRNE LATQKTQVLALHMAYVDTDLTHGFDVPKSSPEEIVKRALDGLESGLDEVLADELTLQVKRGMTVARPSYLPQAS
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=27.4111675126904, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI142976729, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1787335, Length=191, Percent_Identity=29.3193717277487, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082160, Length=213, Percent_Identity=28.169014084507, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789208, Length=211, Percent_Identity=29.3838862559242, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786701, Length=221, Percent_Identity=29.4117647058824, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17561402, Length=195, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643142, Length=180, Percent_Identity=34.4444444444444, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397609, Length=210, Percent_Identity=30.4761904761905, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=27.5, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24597; Mature: 24597
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIENSVVLVTGANRGIGQAFSRELLARGARKVYAGARDPATVTQSGVQALRLDVTKPAD CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHH VAAAAALASDVTLIINNAGIAQPGGFLAADSEDVARRIFETNFFAMLRMSKAFAPILKAN HHHHHHHHCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRNELATQKTQVLALHMAYVDTDL CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC THGFDVPKSSPEEIVKRALDGLESGLDEVLADELTLQVKRGMTVARPSYLPQAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure MKIENSVVLVTGANRGIGQAFSRELLARGARKVYAGARDPATVTQSGVQALRLDVTKPAD CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHH VAAAAALASDVTLIINNAGIAQPGGFLAADSEDVARRIFETNFFAMLRMSKAFAPILKAN HHHHHHHHCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGGALLNVLSVASWVNGGELAAYSASKSAAWSLTNALRNELATQKTQVLALHMAYVDTDL CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC THGFDVPKSSPEEIVKRALDGLESGLDEVLADELTLQVKRGMTVARPSYLPQAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]