| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dksA [C]
Identifier: 91786012
GI number: 91786012
Start: 103719
End: 104111
Strand: Direct
Name: dksA [C]
Synonym: Bpro_0100
Alternate gene names: 91786012
Gene position: 103719-104111 (Clockwise)
Preceding gene: 91786011
Following gene: 91786024
Centisome position: 1.99
GC content: 69.21
Gene sequence:
>393_bases ATGACGACCCTGAGAAACGACCAGCTCGACCTGCTACGCCGCGCGCTCGCCGAACGAGATGCCCAGTTGCAGGTCGAAGT GCGCGCGGCCAAGGAGGTGGCCGCCGAGCGCCCGCCCGCGACCGCGCGCGATGTGCAGGACCCGGGCGAGGACGCGGAAG AGCGTTACCGCCAAGGGCTCGAACACGTCGACCTGCAGCGCGACCAGGAAGAGCTGCGCGCCATCCAGCAGGCGCAAGAA CGCATGGCCGACGGCAGCTATGGCGGTTGCATCGACTGCGGCCAGCCCATTCCCTTCGAGCGCCTGAAGGCGCAGCCGAG CGCGTCACGCTGCATCGCGTGCCAGACGCGCTTCGAGCAAGGGCGCGACACAACCCCGCGCTACACGGTCTGA
Upstream 100 bases:
>100_bases GCCTGTATGCTACGGCTATATCACAGGCATCGTGCTGTCGGTCGCCGGCAGCGCTGGAGCCACTTGACAGGCACGACATT TACATTAGCTGCGCCCGACC
Downstream 100 bases:
>100_bases CGCGCCACGACCTCAGTCGCCTCCGGCAAACCACGCGCCCGATGCGGCCACCCTGGGTGCCTTGAGCGATTTTGTTCAGT TGGCTCAGGCGGTCCTTCTT
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: DNAK Suppressor Protein; Zn-Finger Prokaryotic DksA/TraR C4 Type; DNAk Suppressor Protein; Transcriptional Regulator TraR/DksA Family; Transcriptional Regulators TraR/DksA Family Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQE RMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV
Sequences:
>Translated_130_residues MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQE RMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV >Mature_129_residues TTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQER MADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV
Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14743; Mature: 14611
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGL CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH EHVDLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC GRDTTPRYTV CCCCCCCCCC >Mature Secondary Structure TTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH EHVDLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC GRDTTPRYTV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA