Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is dksA [C]

Identifier: 91786012

GI number: 91786012

Start: 103719

End: 104111

Strand: Direct

Name: dksA [C]

Synonym: Bpro_0100

Alternate gene names: 91786012

Gene position: 103719-104111 (Clockwise)

Preceding gene: 91786011

Following gene: 91786024

Centisome position: 1.99

GC content: 69.21

Gene sequence:

>393_bases
ATGACGACCCTGAGAAACGACCAGCTCGACCTGCTACGCCGCGCGCTCGCCGAACGAGATGCCCAGTTGCAGGTCGAAGT
GCGCGCGGCCAAGGAGGTGGCCGCCGAGCGCCCGCCCGCGACCGCGCGCGATGTGCAGGACCCGGGCGAGGACGCGGAAG
AGCGTTACCGCCAAGGGCTCGAACACGTCGACCTGCAGCGCGACCAGGAAGAGCTGCGCGCCATCCAGCAGGCGCAAGAA
CGCATGGCCGACGGCAGCTATGGCGGTTGCATCGACTGCGGCCAGCCCATTCCCTTCGAGCGCCTGAAGGCGCAGCCGAG
CGCGTCACGCTGCATCGCGTGCCAGACGCGCTTCGAGCAAGGGCGCGACACAACCCCGCGCTACACGGTCTGA

Upstream 100 bases:

>100_bases
GCCTGTATGCTACGGCTATATCACAGGCATCGTGCTGTCGGTCGCCGGCAGCGCTGGAGCCACTTGACAGGCACGACATT
TACATTAGCTGCGCCCGACC

Downstream 100 bases:

>100_bases
CGCGCCACGACCTCAGTCGCCTCCGGCAAACCACGCGCCCGATGCGGCCACCCTGGGTGCCTTGAGCGATTTTGTTCAGT
TGGCTCAGGCGGTCCTTCTT

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: DNAK Suppressor Protein; Zn-Finger Prokaryotic DksA/TraR C4 Type; DNAk Suppressor Protein; Transcriptional Regulator TraR/DksA Family; Transcriptional Regulators TraR/DksA Family Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQE
RMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV

Sequences:

>Translated_130_residues
MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQE
RMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV
>Mature_129_residues
TTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQRDQEELRAIQQAQER
MADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQGRDTTPRYTV

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14743; Mature: 14611

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGL
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EHVDLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC
GRDTTPRYTV
CCCCCCCCCC
>Mature Secondary Structure 
TTLRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EHVDLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC
GRDTTPRYTV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA