| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785978
Identifier: 91785978
GI number: 91785978
Start: 69250
End: 70635
Strand: Direct
Name: 91785978
Synonym: Bpro_0065
Alternate gene names: NA
Gene position: 69250-70635 (Clockwise)
Preceding gene: 91785977
Following gene: 91785979
Centisome position: 1.33
GC content: 70.56
Gene sequence:
>1386_bases ATGGCAAAAGTTTTTAAGTGGGCGGTGTATGTTTCGCTGGGGCTGGCCGTCCTGCTGGCGGCGGTGGCCTTCACGCTGCA CCGTTGGGTGAGCACGGACGATTTCAGGCAGCGCGTCGAGCATGAAGCCTCGGCGGCGTTGGGGATGCCGGTCACGCTGG CCGGGGTGGCCGTGGATGTGTGGCCCTTGCCCGCCGTCGCGCTGACCGGCATCGTGGTGCAGAGCAAGCCCCCCCTCACA CTGGAGCGCGTGGAGGTGCGGCCCCAGTGGCAACCCCTGTTGCAGGGGCGCCTGGCGATTTCCACGCTGCTGGTGCGGCG GGCTGTGTTGCCGCAGCAGGGCATAGACGCGGTGTTGCTGGCGCTGCAGAAGAAAAAGCAGCCGGCGTCCGCCAAGCAGG GGCCCAAGCCAAAGACGCCTGACCCCGCGCCGGAGTCGGCGGGTCTGGAGGGCCTGCCGCGCCGCACGGTGCTGGACGAG GTGACCTGGATCAGTGCGGCCGGTGCGCGCACCACGGTGGCGGCGGAGGCCGCGCTGGCCGATGACGGCCTGCCCGACAG CGTGTCGTTCAAGCTGCTCAAGGGAAATCTGCAGGGACTGCGGGCCACGCTGCAACGTGAAGAGCCCAAACCCGCTGACA ACGCGAGCAAGGCCGGCGATGCCGTTGTTGGCGAGGACCGCTGGGCCCTGCGGGTCGAGGTGGGCGGCGGCAAGATCGAG GGTCGGCTGGCCCTGCGTCGTGCGCCCGCGGGCGCCCCGGTCAAGCCCGGCGAGGCCCTGGCTCTGCAGGGCCAGCTGCA AACGCGTGGCGTCGAGGTGTCTGCGCTGACCGCACCGGCCGGTGCGCTGTCGGGCCAGCTGGAGGCGACCACCAGCCTGA ACGCCCGGGCAGCGACCACGGGCGGCCTGGTGGATGCGCTGCAGAGCCACACCACGTTCACCGTGCGCAATGCGGTGATC AATGGCCTGGACCTGGCCAAGGCCGTACAAACCGTGGGCCTGAGCCGCGGCGGGCAGACGCGACTGGACACGCTGGCCGG GCAGGTCAACACCCAGGGCCGGGCGGCGCAGCTGAGCAACCTCGTGGCGAGCTCGGGCGTGCTGAGCGCCACCGGCAATG TGGCGATATCGCCGGCCAAGGCGCTGAGCGGGCGTGTCATTGTGAATGTGGCGGGCGACAGCAAGGTGGGCCAGGCCATT GGCGGCGCCGTGGGTGTGCCGCTGACGGTGGGCGGCACGCTGGACAAGCCCGAGGTGACGCTGTCGCGTTCGGCCCTGCT GGGCGCGGCCATTGGCACGGCGCTGCTGCCGGGTGTTGGCACCGGGGCCGGCGCCAACCTGGGCGATCGCGTGGGTGAGG GCTTTCGCAGCCTGTTCGGCAAATAA
Upstream 100 bases:
>100_bases TGGCGTTGTCCTTGTTGATCCTGGAAGGGTGGCTGGAAATAGCTCCCTGATCGGGAGGTGTTTTCTGCGGCGTGCGGCCT GAAACCGCCACAATAGCCGG
Downstream 100 bases:
>100_bases GCCTGACCGGTGCTCCAGGGCCTCTATTGGCAGGCCCTCAACGCTAGAAAAATCATAGCAACCGGATGCACTGCGGCCTT GTCCTACAGTGCCACGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAKVFKWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAGVAVDVWPLPAVALTGIVVQSKPPLT LERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLLALQKKKQPASAKQGPKPKTPDPAPESAGLEGLPRRTVLDE VTWISAAGARTTVAAEAALADDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEVGGGKIE GRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSALTAPAGALSGQLEATTSLNARAATTGGLVDALQSHTTFTVRNAVI NGLDLAKAVQTVGLSRGGQTRLDTLAGQVNTQGRAAQLSNLVASSGVLSATGNVAISPAKALSGRVIVNVAGDSKVGQAI GGAVGVPLTVGGTLDKPEVTLSRSALLGAAIGTALLPGVGTGAGANLGDRVGEGFRSLFGK
Sequences:
>Translated_461_residues MAKVFKWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAGVAVDVWPLPAVALTGIVVQSKPPLT LERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLLALQKKKQPASAKQGPKPKTPDPAPESAGLEGLPRRTVLDE VTWISAAGARTTVAAEAALADDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEVGGGKIE GRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSALTAPAGALSGQLEATTSLNARAATTGGLVDALQSHTTFTVRNAVI NGLDLAKAVQTVGLSRGGQTRLDTLAGQVNTQGRAAQLSNLVASSGVLSATGNVAISPAKALSGRVIVNVAGDSKVGQAI GGAVGVPLTVGGTLDKPEVTLSRSALLGAAIGTALLPGVGTGAGANLGDRVGEGFRSLFGK >Mature_460_residues AKVFKWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAGVAVDVWPLPAVALTGIVVQSKPPLTL ERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLLALQKKKQPASAKQGPKPKTPDPAPESAGLEGLPRRTVLDEV TWISAAGARTTVAAEAALADDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEVGGGKIEG RLALRRAPAGAPVKPGEALALQGQLQTRGVEVSALTAPAGALSGQLEATTSLNARAATTGGLVDALQSHTTFTVRNAVIN GLDLAKAVQTVGLSRGGQTRLDTLAGQVNTQGRAAQLSNLVASSGVLSATGNVAISPAKALSGRVIVNVAGDSKVGQAIG GAVGVPLTVGGTLDKPEVTLSRSALLGAAIGTALLPGVGTGAGANLGDRVGEGFRSLFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47125; Mature: 46994
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVFKWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAGVAVDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECEEEEC WPLPAVALTGIVVQSKPPLTLERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLL CCCCHHHHHCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALQKKKQPASAKQGPKPKTPDPAPESAGLEGLPRRTVLDEVTWISAAGARTTVAAEAALA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHC DDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEVGGGKIE CCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCEEE GRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSALTAPAGALSGQLEATTSLNARAATT CEEEEEECCCCCCCCCCCEEEEECCHHHCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC GGLVDALQSHTTFTVRNAVINGLDLAKAVQTVGLSRGGQTRLDTLAGQVNTQGRAAQLSN CHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHH LVASSGVLSATGNVAISPAKALSGRVIVNVAGDSKVGQAIGGAVGVPLTVGGTLDKPEVT HHHHCCCEECCCCEEECCHHHCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCCCCCEE LSRSALLGAAIGTALLPGVGTGAGANLGDRVGEGFRSLFGK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AKVFKWAVYVSLGLAVLLAAVAFTLHRWVSTDDFRQRVEHEASAALGMPVTLAGVAVDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECEEEEC WPLPAVALTGIVVQSKPPLTLERVEVRPQWQPLLQGRLAISTLLVRRAVLPQQGIDAVLL CCCCHHHHHCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALQKKKQPASAKQGPKPKTPDPAPESAGLEGLPRRTVLDEVTWISAAGARTTVAAEAALA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHC DDGLPDSVSFKLLKGNLQGLRATLQREEPKPADNASKAGDAVVGEDRWALRVEVGGGKIE CCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEEEEECCCEEE GRLALRRAPAGAPVKPGEALALQGQLQTRGVEVSALTAPAGALSGQLEATTSLNARAATT CEEEEEECCCCCCCCCCCEEEEECCHHHCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC GGLVDALQSHTTFTVRNAVINGLDLAKAVQTVGLSRGGQTRLDTLAGQVNTQGRAAQLSN CHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHH LVASSGVLSATGNVAISPAKALSGRVIVNVAGDSKVGQAIGGAVGVPLTVGGTLDKPEVT HHHHCCCEECCCCEEECCHHHCCCEEEEEECCCCHHHHHHCCCCCCCEEECCCCCCCCEE LSRSALLGAAIGTALLPGVGTGAGANLGDRVGEGFRSLFGK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA