| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gsiC [H]
Identifier: 91785972
GI number: 91785972
Start: 61678
End: 62634
Strand: Direct
Name: gsiC [H]
Synonym: Bpro_0059
Alternate gene names: 91785972
Gene position: 61678-62634 (Clockwise)
Preceding gene: 91785971
Following gene: 91785973
Centisome position: 1.19
GC content: 64.26
Gene sequence:
>957_bases ATGAACCTGCAACTCCTGCGCCTTATCGCGGGCCGGCTGGCCGTGGGGGTGGTTTCACTCCTTATTGTGTCGGCCGTTGT GTTTGCGATCACGGGCTTGTTGCCTGGCGACGCGGCGCAGGAGCAGCTGGGCCAGGAGGCGACGCCTGAAGCCCTGGCTG CGCTGCGCCAGCAGATGGGCCTCACGCAGTCCGGCCCGGAACGTTACTGGCAGTGGCTGAACGGCTTGCTGCGCGGCAAC CCCGGCCAGTCGATTGTCAGCAGCGCACCGGTCGCCGACCTGATCGGCAGCCGGCTGCCCAACTCGCTGATGCTGGCCGG CGTGACCGCGCTGGTGTCGGTGCCGCTGGCGCTGCTGCTGGGCATTTTGTCGGCGGTCTGGCGCGGCTCCTGGTTTGACC GCGCTGCCAGCATGGGCGCGGTGGCCGTGGTCTCGGTGCCCGAATTTTTGGTTGCCACACTCGCGGTGCTGGTGTTTGCG GTGCATTTGCGCTGGCTGCCGGCGCTGTCTTATTCGGTGGACATCTCGTCGCCGGGCCAGATGCTGCGCTCGTTTGCGAT GCCGGTCATGAGCCTGTCCTGCGTGATCATTGCGCAGATGATGCGCATGACACGCGCTGCGGTGATTGACCAGCTGCGCG CGCCGTATATCGAGATGGTCAAGCTCAAGGGCGCTTCGCCTGCGCGCATGGTGCTGGCGCATGCCTTGCCCAACGCGATC GGCCCGATAGCCAATGCGGTGGCGCTGAGCCTGTCGTATTTGCTGGGTGGCGTGATCATTATCGAAACCATTTTTAACTA CCCCGGCATCGCCAAACTCATGGTCGATGGCGTGAGCCAGCGCGACATGCCGCTGGTGCAAGCCTGCGCGATGATTTTTT GCGCTGCTTACCTGATTCTTGTGACGCTGGCCGACCTCTGCGGCATCGTCGCCAACCCAAGGCTGCGCCACCAATGA
Upstream 100 bases:
>100_bases GAAGGGGAGGTAGCATGAGTCCCCACGCTCGGCACTGCGTGTCTTCGCTGCTCACCGAGGTGGCATGCCCCGCTTGGGGT GGCCCGGCGCGAGGCATGGC
Downstream 100 bases:
>100_bases GCTCCGCTATTGAAACAATTCCGCCCGCCGCCGTTCCGGCGCGCCTGGTGCCGCGCCTGTCGCGCTGGTCGCGCACCGGC CTGCTGGGCCTGGCGGTGCT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNLQLLRLIAGRLAVGVVSLLIVSAVVFAITGLLPGDAAQEQLGQEATPEALAALRQQMGLTQSGPERYWQWLNGLLRGN PGQSIVSSAPVADLIGSRLPNSLMLAGVTALVSVPLALLLGILSAVWRGSWFDRAASMGAVAVVSVPEFLVATLAVLVFA VHLRWLPALSYSVDISSPGQMLRSFAMPVMSLSCVIIAQMMRMTRAAVIDQLRAPYIEMVKLKGASPARMVLAHALPNAI GPIANAVALSLSYLLGGVIIIETIFNYPGIAKLMVDGVSQRDMPLVQACAMIFCAAYLILVTLADLCGIVANPRLRHQ
Sequences:
>Translated_318_residues MNLQLLRLIAGRLAVGVVSLLIVSAVVFAITGLLPGDAAQEQLGQEATPEALAALRQQMGLTQSGPERYWQWLNGLLRGN PGQSIVSSAPVADLIGSRLPNSLMLAGVTALVSVPLALLLGILSAVWRGSWFDRAASMGAVAVVSVPEFLVATLAVLVFA VHLRWLPALSYSVDISSPGQMLRSFAMPVMSLSCVIIAQMMRMTRAAVIDQLRAPYIEMVKLKGASPARMVLAHALPNAI GPIANAVALSLSYLLGGVIIIETIFNYPGIAKLMVDGVSQRDMPLVQACAMIFCAAYLILVTLADLCGIVANPRLRHQ >Mature_318_residues MNLQLLRLIAGRLAVGVVSLLIVSAVVFAITGLLPGDAAQEQLGQEATPEALAALRQQMGLTQSGPERYWQWLNGLLRGN PGQSIVSSAPVADLIGSRLPNSLMLAGVTALVSVPLALLLGILSAVWRGSWFDRAASMGAVAVVSVPEFLVATLAVLVFA VHLRWLPALSYSVDISSPGQMLRSFAMPVMSLSCVIIAQMMRMTRAAVIDQLRAPYIEMVKLKGASPARMVLAHALPNAI GPIANAVALSLSYLLGGVIIIETIFNYPGIAKLMVDGVSQRDMPLVQACAMIFCAAYLILVTLADLCGIVANPRLRHQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=34.0764331210191, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=28.4023668639053, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1789888, Length=317, Percent_Identity=29.9684542586751, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=27.7070063694268, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1787761, Length=295, Percent_Identity=29.1525423728814, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1788504, Length=324, Percent_Identity=25.3086419753086, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=25.8181818181818, Blast_Score=99, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33729; Mature: 33729
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQLLRLIAGRLAVGVVSLLIVSAVVFAITGLLPGDAAQEQLGQEATPEALAALRQQMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHC LTQSGPERYWQWLNGLLRGNPGQSIVSSAPVADLIGSRLPNSLMLAGVTALVSVPLALLL CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GILSAVWRGSWFDRAASMGAVAVVSVPEFLVATLAVLVFAVHLRWLPALSYSVDISSPGQ HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHH MLRSFAMPVMSLSCVIIAQMMRMTRAAVIDQLRAPYIEMVKLKGASPARMVLAHALPNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH GPIANAVALSLSYLLGGVIIIETIFNYPGIAKLMVDGVSQRDMPLVQACAMIFCAAYLIL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VTLADLCGIVANPRLRHQ HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLQLLRLIAGRLAVGVVSLLIVSAVVFAITGLLPGDAAQEQLGQEATPEALAALRQQMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHC LTQSGPERYWQWLNGLLRGNPGQSIVSSAPVADLIGSRLPNSLMLAGVTALVSVPLALLL CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GILSAVWRGSWFDRAASMGAVAVVSVPEFLVATLAVLVFAVHLRWLPALSYSVDISSPGQ HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHH MLRSFAMPVMSLSCVIIAQMMRMTRAAVIDQLRAPYIEMVKLKGASPARMVLAHALPNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH GPIANAVALSLSYLLGGVIIIETIFNYPGIAKLMVDGVSQRDMPLVQACAMIFCAAYLIL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VTLADLCGIVANPRLRHQ HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]