Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ooxA [H]

Identifier: 91785962

GI number: 91785962

Start: 50256

End: 51632

Strand: Reverse

Name: ooxA [H]

Synonym: Bpro_0049

Alternate gene names: 91785962

Gene position: 51632-50256 (Counterclockwise)

Preceding gene: 91785963

Following gene: 91785961

Centisome position: 0.99

GC content: 67.61

Gene sequence:

>1377_bases
GTGAACCCGCAAGTCATCGTCGTGGGCGCGGGCCCCGCCGGCATACGCGCGGCCCAGGCACTGGCAGAAGCCGGCCTGCG
GCCCATCGTGATTGACGAAGGCAGGCGCGACGGCGGGCAGATCTACCGCCGCCAGCCCGAAGGTTTTAAACGCTCTTACG
CCACCTTGTACGGCAGCGAAGCCGGCAAGGCCCAATCCCTGCACCAGGACTTTGAGGCGCTGCGCCAAAAAATTGATTAC
CGCAGCGACACCCTGAGCTGGAACCTCACCCCCGGCATGCTGCATACCGTGAGCCAGGGCCGGGCGCAGAGCCTGGCTTA
TGACGCGCTGATCATCTGCAGCGGCGCGACCGACAGGCTGATGCCGGTCGAAGGCTGGAACCTGGCCGGTTGCTACAGCT
TGGGCGCAGCGCAGATTGCGCTCAAGTCGCAAGCCTGCTCGATTGGCGCCAGCGTGGTGTTTGCCGGCACCGGGCCGCTG
CTGTACCTGGTGGCCGCGCAATATGTGAAGGCCGGCGCCAACGTTCAAGCCGTGCTCGACACCTCGCCGGCCCTGCCGCC
GCTGGCCGCACTGCGCGGTTTGCTGGCGCGCCCGCGCCTGCTGCTGCGCGGCCTGGGGCTGATCGCCTCGCTGCGACGCG
CGGGCGTCAAGGTCTGGCAAGGCATCACGCCCTTGCGTGTTGAAGGCGCGCCCGACAGCGGCGTCAGCGGCATCACGCTG
CGCGATGCCCATGGCAACAAACAAACCATCCCATGCGATGCCGTGGCGCTCGGTTACCACTTGCGCGCGGAAACACAGCT
CGCCGATCTGGCGGGCTGCGACTTTGTGTTTGATGCCTTGAGCCGCCAATGGCTGCCGCGCATGGACGGCGATGGCCGCA
GCAGCATGGCTGGCATCTATCTGGCCGGCGACGGCGCACGCCTGCTGGGCGCGGACGGCGCCGAGGCTGCAGGCCGGCTG
GCCGCACTGGCAGCCCTGCACGACCTGGGCCATGGCCAGGGTCGCACGCTGTTCAAGGAGCAGGCGCCGGGACTGCGCAG
CACCTTGAACACCATGAACAATTTCCGTGAAGGCCTGGCGCGCGCATTTCCGTGGCCGCACCAGCAGGCCGCCACGCTGC
CCGATGCGGCCGTGGTGTGCCGCTGCGAAGCCGTGACCGCCGGCGAATTGCGCCGCTCGGTGCACGAGATGGAGAGCCAG
GAAATCAACCGCGCCAAAGCCTTCAGCCGCGTCGGCATGGGGCGTTGCCAGGGCCGTTATTGCGGCCATGCGGCGGCGGA
AGTGGTGGCTCATGCGGCGCGTATTCCGATTGAAGATGTGGGGCGGCTACGCTCGCAAGCGCCCGTTAAACCGCTGTTGA
TGGATGCGCAGCCATGA

Upstream 100 bases:

>100_bases
GGGACCAGACCGGGCAACGCCTGCGCGCCTGCACCACACCCGCGCAAGCCGGCATGGTCATCAGCACCCGCAGCCCGGAG
GCGACATGGCCGCAACACCC

Downstream 100 bases:

>100_bases
GCCAGGACAAACGCAGCGATGTATTGATTATTGGTGGCGGCCTGATGGGCGTGACCACGGCTTTCTTTTTGCGCCATCAC
CACGGCCTTGGCGTGACCTT

Product: BFD-like protein

Products: Dihydroxyacetone phosphate; Ubiquinol-8 [C]

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNPQVIVVGAGPAGIRAAQALAEAGLRPIVIDEGRRDGGQIYRRQPEGFKRSYATLYGSEAGKAQSLHQDFEALRQKIDY
RSDTLSWNLTPGMLHTVSQGRAQSLAYDALIICSGATDRLMPVEGWNLAGCYSLGAAQIALKSQACSIGASVVFAGTGPL
LYLVAAQYVKAGANVQAVLDTSPALPPLAALRGLLARPRLLLRGLGLIASLRRAGVKVWQGITPLRVEGAPDSGVSGITL
RDAHGNKQTIPCDAVALGYHLRAETQLADLAGCDFVFDALSRQWLPRMDGDGRSSMAGIYLAGDGARLLGADGAEAAGRL
AALAALHDLGHGQGRTLFKEQAPGLRSTLNTMNNFREGLARAFPWPHQQAATLPDAAVVCRCEAVTAGELRRSVHEMESQ
EINRAKAFSRVGMGRCQGRYCGHAAAEVVAHAARIPIEDVGRLRSQAPVKPLLMDAQP

Sequences:

>Translated_458_residues
MNPQVIVVGAGPAGIRAAQALAEAGLRPIVIDEGRRDGGQIYRRQPEGFKRSYATLYGSEAGKAQSLHQDFEALRQKIDY
RSDTLSWNLTPGMLHTVSQGRAQSLAYDALIICSGATDRLMPVEGWNLAGCYSLGAAQIALKSQACSIGASVVFAGTGPL
LYLVAAQYVKAGANVQAVLDTSPALPPLAALRGLLARPRLLLRGLGLIASLRRAGVKVWQGITPLRVEGAPDSGVSGITL
RDAHGNKQTIPCDAVALGYHLRAETQLADLAGCDFVFDALSRQWLPRMDGDGRSSMAGIYLAGDGARLLGADGAEAAGRL
AALAALHDLGHGQGRTLFKEQAPGLRSTLNTMNNFREGLARAFPWPHQQAATLPDAAVVCRCEAVTAGELRRSVHEMESQ
EINRAKAFSRVGMGRCQGRYCGHAAAEVVAHAARIPIEDVGRLRSQAPVKPLLMDAQP
>Mature_458_residues
MNPQVIVVGAGPAGIRAAQALAEAGLRPIVIDEGRRDGGQIYRRQPEGFKRSYATLYGSEAGKAQSLHQDFEALRQKIDY
RSDTLSWNLTPGMLHTVSQGRAQSLAYDALIICSGATDRLMPVEGWNLAGCYSLGAAQIALKSQACSIGASVVFAGTGPL
LYLVAAQYVKAGANVQAVLDTSPALPPLAALRGLLARPRLLLRGLGLIASLRRAGVKVWQGITPLRVEGAPDSGVSGITL
RDAHGNKQTIPCDAVALGYHLRAETQLADLAGCDFVFDALSRQWLPRMDGDGRSSMAGIYLAGDGARLLGADGAEAAGRL
AALAALHDLGHGQGRTLFKEQAPGLRSTLNTMNNFREGLARAFPWPHQQAATLPDAAVVCRCEAVTAGELRRSVHEMESQ
EINRAKAFSRVGMGRCQGRYCGHAAAEVVAHAARIPIEDVGRLRSQAPVKPLLMDAQP

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: 1.1.99.5 [C]

Molecular weight: Translated: 48560; Mature: 48560

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQVIVVGAGPAGIRAAQALAEAGLRPIVIDEGRRDGGQIYRRQPEGFKRSYATLYGSE
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCC
AGKAQSLHQDFEALRQKIDYRSDTLSWNLTPGMLHTVSQGRAQSLAYDALIICSGATDRL
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCHHHHHHEEEEEEECCCCCCE
MPVEGWNLAGCYSLGAAQIALKSQACSIGASVVFAGTGPLLYLVAAQYVKAGANVQAVLD
EECCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEC
TSPALPPLAALRGLLARPRLLLRGLGLIASLRRAGVKVWQGITPLRVEGAPDSGVSGITL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
RDAHGNKQTIPCDAVALGYHLRAETQLADLAGCDFVFDALSRQWLPRMDGDGRSSMAGIY
ECCCCCCCCCCHHHHHHCEEEECCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
LAGDGARLLGADGAEAAGRLAALAALHDLGHGQGRTLFKEQAPGLRSTLNTMNNFREGLA
EECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH
RAFPWPHQQAATLPDAAVVCRCEAVTAGELRRSVHEMESQEINRAKAFSRVGMGRCQGRY
HHCCCCCCHHCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
CGHAAAEVVAHAARIPIEDVGRLRSQAPVKPLLMDAQP
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNPQVIVVGAGPAGIRAAQALAEAGLRPIVIDEGRRDGGQIYRRQPEGFKRSYATLYGSE
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCC
AGKAQSLHQDFEALRQKIDYRSDTLSWNLTPGMLHTVSQGRAQSLAYDALIICSGATDRL
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCHHHHHHEEEEEEECCCCCCE
MPVEGWNLAGCYSLGAAQIALKSQACSIGASVVFAGTGPLLYLVAAQYVKAGANVQAVLD
EECCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEC
TSPALPPLAALRGLLARPRLLLRGLGLIASLRRAGVKVWQGITPLRVEGAPDSGVSGITL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
RDAHGNKQTIPCDAVALGYHLRAETQLADLAGCDFVFDALSRQWLPRMDGDGRSSMAGIY
ECCCCCCCCCCHHHHHHCEEEECCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
LAGDGARLLGADGAEAAGRLAALAALHDLGHGQGRTLFKEQAPGLRSTLNTMNNFREGLA
EECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH
RAFPWPHQQAATLPDAAVVCRCEAVTAGELRRSVHEMESQEINRAKAFSRVGMGRCQGRY
HHCCCCCCHHCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
CGHAAAEVVAHAARIPIEDVGRLRSQAPVKPLLMDAQP
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glycerol 3-phosphate; Ubiquinone-8 [C]

Specific reaction: Glycerol 3-phosphate + Ubiquinone-8 --> Dihydroxyacetone phosphate + Ubiquinol-8 [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA