| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785960
Identifier: 91785960
GI number: 91785960
Start: 48710
End: 49069
Strand: Direct
Name: 91785960
Synonym: Bpro_0047
Alternate gene names: NA
Gene position: 48710-49069 (Clockwise)
Preceding gene: 91785955
Following gene: 91785968
Centisome position: 0.94
GC content: 63.33
Gene sequence:
>360_bases ATGGCTATACAGATTCTGAAACAAAGCGCATCGATCTCCACCCTGAGCCCGCAAGGCCCGGTAGGCCGTCCGTTGACGCA GCCCGCCTGCGAGACCCGCGGCATTGAAGTGGAATTGAGCGGTGCGGGCGACAACCGCAGCGGCCTGTGGGAATGCCTGC CCGGCAAGTTCGAGCGCCAGCTGGCGCAAGCCGAAGTCATGCACATCCTCTCGGGATCCTGCAGCTTCACGCCCACCGGC GGCGAGACGCAGGAGATCGCGGCCGGTGACACGCTGTTTTTCCCGGCCAACACCACGGGCGTCTGGCATATCCGCGAAAC CCTGCGCAAGGTTTATGTGGTGATGGCGTCAACGGCTTGA
Upstream 100 bases:
>100_bases GCGGCGTTCAAGGGGCCGACAAAAACATCCAATCCGCCGCGCCCGCGCAGGGTTAGGCTGGCACCCTTTAAACGCTCTCC TGCACAACAGGAAAACACAT
Downstream 100 bases:
>100_bases ATCCCGGCCCCCAAAAAACGCCGCATTGGATGGCGGCGCCAGGCCCGGATTCAAAAATCTCAGGCAAACCGCCCGATGGA AAACGCCTCGATCGGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAIQILKQSASISTLSPQGPVGRPLTQPACETRGIEVELSGAGDNRSGLWECLPGKFERQLAQAEVMHILSGSCSFTPTG GETQEIAAGDTLFFPANTTGVWHIRETLRKVYVVMASTA
Sequences:
>Translated_119_residues MAIQILKQSASISTLSPQGPVGRPLTQPACETRGIEVELSGAGDNRSGLWECLPGKFERQLAQAEVMHILSGSCSFTPTG GETQEIAAGDTLFFPANTTGVWHIRETLRKVYVVMASTA >Mature_118_residues AIQILKQSASISTLSPQGPVGRPLTQPACETRGIEVELSGAGDNRSGLWECLPGKFERQLAQAEVMHILSGSCSFTPTGG ETQEIAAGDTLFFPANTTGVWHIRETLRKVYVVMASTA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12706; Mature: 12574
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQILKQSASISTLSPQGPVGRPLTQPACETRGIEVELSGAGDNRSGLWECLPGKFERQ CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHH LAQAEVMHILSGSCSFTPTGGETQEIAAGDTLFFPANTTGVWHIRETLRKVYVVMASTA HHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCCCCEEHHHHHHHHHHHHHEECCC >Mature Secondary Structure AIQILKQSASISTLSPQGPVGRPLTQPACETRGIEVELSGAGDNRSGLWECLPGKFERQ CEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHH LAQAEVMHILSGSCSFTPTGGETQEIAAGDTLFFPANTTGVWHIRETLRKVYVVMASTA HHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCCCCEEHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA