| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785917
Identifier: 91785917
GI number: 91785917
Start: 5583
End: 7565
Strand: Direct
Name: 91785917
Synonym: Bpro_0004
Alternate gene names: NA
Gene position: 5583-7565 (Clockwise)
Preceding gene: 91785916
Following gene: 91785919
Centisome position: 0.11
GC content: 51.99
Gene sequence:
>1983_bases GTGACGAGTCGGGCCTACTACTCAGAACTCATTGAAGAGTTCGTCGGTGAGTCGTCAGACCAAATATTGGGGGTTCTTTC ACGGCGCAGTTCCTTTGCTGTTGAAGGGACTCAGCGTGATGCATGGGTAGAACAGATTCGAATACTTAAACGAATCCTGG CCCCATACCGTCGGCGTGGAAAAGTTTACTTTGAGTACTCTGTTCCGAGGCTGGGCAAACGAATCGATGTGATCGCGGTT ATTGATCACGTCGTATTCGTTCTCGAATTTAAGGTTGGCGAGTCCGAGTTTTCGAGCAGCGCAATTGACCAGGTATGGGA CTACGCGCTGGATCTGAAAAACTTTCATGAGACAAGTCATGACAAACCAGTTGCTCCGATTCTTGTTGCGACGAGGGCTG AAAGCGGCGCAACTGTAGTTGCTGCTGCCCACGACGACATAGTTCTTCGCCCAATCCTTGTCGCGTCAGATGATCTGTCA GTTGCTATTGAGCAAGTGCTGGCTTTGTGCGATGGACCCATCATTTCCCCTTCTGTTTGGGAAAGAGGGCGGTATTACCC AACCCCGACCATTGTTGAAGCCGCAATGGCTTTGTACGGAGGGCATGCTGTTGCCGAAATATCACGCAATGACGCGAGTG CGATCAATCTGAGCCGGACTTCTGAATCTGTTGCAGAGGTCATCCGTTCCGCAAAAGAGAATTCCAGAAAGGCAATTTGT TTCGTCACGGGTGTGCCTGGTGCTGGAAAGACGCTCGTTGGGCTGAACATTGCAACCAAGCATATTGACAAGGACAGCGA GCTATACAGCGTCTTTCTTTCTGGGAATGGTCCGCTGGTCGATATCCTGAGGGAGGCTCTTGCGCGCGATCGGGTGTCGA GGGAGGTGGCCACGGGACGAAAGATGAAGAAGGGCACGGCCGTCAGTGAAGTGAAGGCGTTCATTCAGAACGTCCATCAT TTTCGCGATGATTGTTTGCAGGATATGGCGCGGCCACCGGTTGAACACGTTGCAATTTTTGACGAGGCGCAGCGCGCATG GAATCTTGAGCAGACCGCCGCCTTTATGAGTCGTAAAAAAGGGCGGGCTGACTTCAAGCTGTCGGAGCCGGAGTTCTTGA TCTCTTGTTTGGACCGCCACCAGGACTGGGCGGTTGTAGTTTGCTTGGTAGGTGGCGGACAAGAAATCAATACAGGGGAG GCCGGCATCGGCGAATGGATTCAATCATTGCAGCGCTCGTTTCCAGAATGGCGAATTCACATTTCTCCGCAACTTCATGA TGAAGAGTACGGTGCAGGAGCGGTCATGCGAGAAATTGCTGATCGTCCAGGCGTCCACTTGAACGAACATCTTCATCTGG CCGTGTCAATGCGGTCATTTCGAGCGGAGCATGTTTCAGCCTTGGTCAAACACTTGTTGGATCGCGACGCTGATGCCGCC AGGGCTATGCTTGCGCGGGTTCAGGACCGCTATCCAATCGTTGTTACCCGAAGCCTGCAAAAGGCTAAGAGTTGGCTTAA GCAGCAAGCCCGAGGTTCGGAACGGTTTGGAATGGTTGTTTCTTCGCAAGCGCAGAGATTGAGGCCTCATGCAATTGACG TGAGGTCGCCGATGGATCCAATCCACTGGTTCTTGGATGGAAAACATGATGTGCGGTCATCGTTCTATTTGGAGGACGTG GCAACTGAATTCCATGTCCAAGGACTTGAGCTTGATTGGGCATGTGTAGTTTGGGACGCTGATTTTCGTTACGGGCACGA CGGATGGCTACATCGTTCGTTTGTGGGGAGCAAGTGGAACAAGATTAACTTGCCACACCGGCAGACATTTTTAAAGAACG CCTACCGTGTGTTGCTGACAAGGGCGCGACAAGGAATGGTGATCGTTGTCCCCGAGGGAGATATCGAGGACCCGACCCGG GCCCCATCTTTCTATGACCCAACCTTTGATTACTTGAGCAGTATTGGCTTTAGTCAGAGTTAG
Upstream 100 bases:
>100_bases TCACCATGCTGATGGGTGATGAGGTCGAGCCGCGTCGGGAGTTTATTGAGCAGAATGCGTTGCGGGCGGCGAATATTGAT GTCTAACGCCTGAACAAGTT
Downstream 100 bases:
>100_bases GTCTTAGGCTATTTAACGCAGAACTCTGCCGCGATGAAGCAAACATTCCAATCTCCAAAGCATTTATCGCTGTAGACCAG AGTTCCCTCTATAACTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MTSRAYYSELIEEFVGESSDQILGVLSRRSSFAVEGTQRDAWVEQIRILKRILAPYRRRGKVYFEYSVPRLGKRIDVIAV IDHVVFVLEFKVGESEFSSSAIDQVWDYALDLKNFHETSHDKPVAPILVATRAESGATVVAAAHDDIVLRPILVASDDLS VAIEQVLALCDGPIISPSVWERGRYYPTPTIVEAAMALYGGHAVAEISRNDASAINLSRTSESVAEVIRSAKENSRKAIC FVTGVPGAGKTLVGLNIATKHIDKDSELYSVFLSGNGPLVDILREALARDRVSREVATGRKMKKGTAVSEVKAFIQNVHH FRDDCLQDMARPPVEHVAIFDEAQRAWNLEQTAAFMSRKKGRADFKLSEPEFLISCLDRHQDWAVVVCLVGGGQEINTGE AGIGEWIQSLQRSFPEWRIHISPQLHDEEYGAGAVMREIADRPGVHLNEHLHLAVSMRSFRAEHVSALVKHLLDRDADAA RAMLARVQDRYPIVVTRSLQKAKSWLKQQARGSERFGMVVSSQAQRLRPHAIDVRSPMDPIHWFLDGKHDVRSSFYLEDV ATEFHVQGLELDWACVVWDADFRYGHDGWLHRSFVGSKWNKINLPHRQTFLKNAYRVLLTRARQGMVIVVPEGDIEDPTR APSFYDPTFDYLSSIGFSQS
Sequences:
>Translated_660_residues MTSRAYYSELIEEFVGESSDQILGVLSRRSSFAVEGTQRDAWVEQIRILKRILAPYRRRGKVYFEYSVPRLGKRIDVIAV IDHVVFVLEFKVGESEFSSSAIDQVWDYALDLKNFHETSHDKPVAPILVATRAESGATVVAAAHDDIVLRPILVASDDLS VAIEQVLALCDGPIISPSVWERGRYYPTPTIVEAAMALYGGHAVAEISRNDASAINLSRTSESVAEVIRSAKENSRKAIC FVTGVPGAGKTLVGLNIATKHIDKDSELYSVFLSGNGPLVDILREALARDRVSREVATGRKMKKGTAVSEVKAFIQNVHH FRDDCLQDMARPPVEHVAIFDEAQRAWNLEQTAAFMSRKKGRADFKLSEPEFLISCLDRHQDWAVVVCLVGGGQEINTGE AGIGEWIQSLQRSFPEWRIHISPQLHDEEYGAGAVMREIADRPGVHLNEHLHLAVSMRSFRAEHVSALVKHLLDRDADAA RAMLARVQDRYPIVVTRSLQKAKSWLKQQARGSERFGMVVSSQAQRLRPHAIDVRSPMDPIHWFLDGKHDVRSSFYLEDV ATEFHVQGLELDWACVVWDADFRYGHDGWLHRSFVGSKWNKINLPHRQTFLKNAYRVLLTRARQGMVIVVPEGDIEDPTR APSFYDPTFDYLSSIGFSQS >Mature_659_residues TSRAYYSELIEEFVGESSDQILGVLSRRSSFAVEGTQRDAWVEQIRILKRILAPYRRRGKVYFEYSVPRLGKRIDVIAVI DHVVFVLEFKVGESEFSSSAIDQVWDYALDLKNFHETSHDKPVAPILVATRAESGATVVAAAHDDIVLRPILVASDDLSV AIEQVLALCDGPIISPSVWERGRYYPTPTIVEAAMALYGGHAVAEISRNDASAINLSRTSESVAEVIRSAKENSRKAICF VTGVPGAGKTLVGLNIATKHIDKDSELYSVFLSGNGPLVDILREALARDRVSREVATGRKMKKGTAVSEVKAFIQNVHHF RDDCLQDMARPPVEHVAIFDEAQRAWNLEQTAAFMSRKKGRADFKLSEPEFLISCLDRHQDWAVVVCLVGGGQEINTGEA GIGEWIQSLQRSFPEWRIHISPQLHDEEYGAGAVMREIADRPGVHLNEHLHLAVSMRSFRAEHVSALVKHLLDRDADAAR AMLARVQDRYPIVVTRSLQKAKSWLKQQARGSERFGMVVSSQAQRLRPHAIDVRSPMDPIHWFLDGKHDVRSSFYLEDVA TEFHVQGLELDWACVVWDADFRYGHDGWLHRSFVGSKWNKINLPHRQTFLKNAYRVLLTRARQGMVIVVPEGDIEDPTRA PSFYDPTFDYLSSIGFSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74149; Mature: 74018
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRAYYSELIEEFVGESSDQILGVLSRRSSFAVEGTQRDAWVEQIRILKRILAPYRRRG CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC KVYFEYSVPRLGKRIDVIAVIDHVVFVLEFKVGESEFSSSAIDQVWDYALDLKNFHETSH CEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC DKPVAPILVATRAESGATVVAAAHDDIVLRPILVASDDLSVAIEQVLALCDGPIISPSVW CCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHH ERGRYYPTPTIVEAAMALYGGHAVAEISRNDASAINLSRTSESVAEVIRSAKENSRKAIC HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEE FVTGVPGAGKTLVGLNIATKHIDKDSELYSVFLSGNGPLVDILREALARDRVSREVATGR EEECCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC KMKKGTAVSEVKAFIQNVHHFRDDCLQDMARPPVEHVAIFDEAQRAWNLEQTAAFMSRKK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC GRADFKLSEPEFLISCLDRHQDWAVVVCLVGGGQEINTGEAGIGEWIQSLQRSFPEWRIH CCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEE ISPQLHDEEYGAGAVMREIADRPGVHLNEHLHLAVSMRSFRAEHVSALVKHLLDRDADAA ECCCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHH RAMLARVQDRYPIVVTRSLQKAKSWLKQQARGSERFGMVVSSQAQRLRPHAIDVRSPMDP HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCH IHWFLDGKHDVRSSFYLEDVATEFHVQGLELDWACVVWDADFRYGHDGWLHRSFVGSKWN HHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCC KINLPHRQTFLKNAYRVLLTRARQGMVIVVPEGDIEDPTRAPSFYDPTFDYLSSIGFSQS CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure TSRAYYSELIEEFVGESSDQILGVLSRRSSFAVEGTQRDAWVEQIRILKRILAPYRRRG CCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCC KVYFEYSVPRLGKRIDVIAVIDHVVFVLEFKVGESEFSSSAIDQVWDYALDLKNFHETSH CEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC DKPVAPILVATRAESGATVVAAAHDDIVLRPILVASDDLSVAIEQVLALCDGPIISPSVW CCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHH ERGRYYPTPTIVEAAMALYGGHAVAEISRNDASAINLSRTSESVAEVIRSAKENSRKAIC HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEE FVTGVPGAGKTLVGLNIATKHIDKDSELYSVFLSGNGPLVDILREALARDRVSREVATGR EEECCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC KMKKGTAVSEVKAFIQNVHHFRDDCLQDMARPPVEHVAIFDEAQRAWNLEQTAAFMSRKK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC GRADFKLSEPEFLISCLDRHQDWAVVVCLVGGGQEINTGEAGIGEWIQSLQRSFPEWRIH CCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEE ISPQLHDEEYGAGAVMREIADRPGVHLNEHLHLAVSMRSFRAEHVSALVKHLLDRDADAA ECCCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHH RAMLARVQDRYPIVVTRSLQKAKSWLKQQARGSERFGMVVSSQAQRLRPHAIDVRSPMDP HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCH IHWFLDGKHDVRSSFYLEDVATEFHVQGLELDWACVVWDADFRYGHDGWLHRSFVGSKWN HHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCC KINLPHRQTFLKNAYRVLLTRARQGMVIVVPEGDIEDPTRAPSFYDPTFDYLSSIGFSQS CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA