| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yjjJ [H]
Identifier: 91214101
GI number: 91214101
Start: 5045463
End: 5046794
Strand: Direct
Name: yjjJ [H]
Synonym: UTI89_C5156
Alternate gene names: 91214101
Gene position: 5045463-5046794 (Clockwise)
Preceding gene: 162138297
Following gene: 162138296
Centisome position: 99.6
GC content: 54.5
Gene sequence:
>1332_bases ATGAGCGAATTGACCGATCTTTTATTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGC GACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGC GTCCTTATCGCGGAATTGAGCGTATTCCCGTATGGCGAGTGGATGATGCCGGAAAGGCGCATAAATTCGCCGACATCCGG TTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACGGTGGTTTGATGGTTTGCCCTGGTATTT GACCGATCTGCGACCGCAGGGGTTTTTGGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTTACTGAAGATA TCCGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAGCGGTGAATACACCGGCGGCTGGCTGGTCGGG GAGGGGAATTATCAGCGATGGATTACTGCACAACGCCCTGCGGCAATTCCTCTGGATCAAAAACTCACCCATTACGAACA ACTGGCAAGCGATGCACTGGCAGGAGAAATTGTGGGTTCTTCTGCGGGCGGTGAGCAGCCAAAATTTACCTGCTATGCAC AAACGCCGTCAGGCAATAAACATGTGCTGGTTAAATTCACCGTGCCACAGCAAACCGCGGTCAGCCAACGTTGGGGCGAC TTGCTTATTGCGGAATCTATTGCCGCGCAAATCCTGCGCGACGGCGGGATCCACGCCATCGAGTCAACGGTGCTTGTAAC AAGTAACAGGCAGGTATTCCTTGAAGCGGAACGATTTGACTGCAAAGGTAACGATGGTCGCTTGCCCATTGTGTCGCTGG AGGCGGTGCAGAGTGAGTTTATCTCTTCTCCGGGATCGTGGCCGGAGGCTATGCGCCGTTTGTGTGAGCAACAACTTGTC ACTCACCAGAGCGTGGCGCAAACAGAAGTGATCTGGGCGTTTGGGCGACTTATCGCCAACAGCGATATGCACGCAGGCAA TTTATCATTTTATTTATCTGAACCACCATTTGCGCTGACGCCCGTCTACGACATGCTGCCGATGGCCTATGCACCAAACA GCGCCGGAATGTTGCGTGATGCTGCCATTGAGGTGAGGTTTGATCTTAACGTCAGTAAAAGTGCATGGTTAACGGCGATC CCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCGGAGATCCGCGTATCAGCGAGGCATTTCGCCACATTGCACAAGAAAT GCCGGAAAAAATCCGGCAAATCGAAGGGAAAGTTGCCCGCATGGGCGGGTAA
Upstream 100 bases:
>100_bases TCTATTCATTTCTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCT ATTCACGAATCTATTCATTA
Downstream 100 bases:
>100_bases CTATCGCACCGCCCCCGCTATCCATGCCGACAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAGCAGCGCTT CGCACTCCTGTTGCAGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDAGKAHKFADIR LCWPQGSCLVTGADGDERWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTEDIRLWQEEDVLYALTVFSGEYTGGWLVG EGNYQRWITAQRPAAIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTCYAQTPSGNKHVLVKFTVPQQTAVSQRWGD LLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPEAMRRLCEQQLV THQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMAYAPNSAGMLRDAAIEVRFDLNVSKSAWLTAI PLAQQFWQTVAGDPRISEAFRHIAQEMPEKIRQIEGKVARMGG
Sequences:
>Translated_443_residues MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDAGKAHKFADIR LCWPQGSCLVTGADGDERWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTEDIRLWQEEDVLYALTVFSGEYTGGWLVG EGNYQRWITAQRPAAIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTCYAQTPSGNKHVLVKFTVPQQTAVSQRWGD LLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPEAMRRLCEQQLV THQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMAYAPNSAGMLRDAAIEVRFDLNVSKSAWLTAI PLAQQFWQTVAGDPRISEAFRHIAQEMPEKIRQIEGKVARMGG >Mature_442_residues SELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDAGKAHKFADIRL CWPQGSCLVTGADGDERWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTEDIRLWQEEDVLYALTVFSGEYTGGWLVGE GNYQRWITAQRPAAIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTCYAQTPSGNKHVLVKFTVPQQTAVSQRWGDL LIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPEAMRRLCEQQLVT HQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMAYAPNSAGMLRDAAIEVRFDLNVSKSAWLTAIP LAQQFWQTVAGDPRISEAFRHIAQEMPEKIRQIEGKVARMGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790845, Length=443, Percent_Identity=97.2911963882619, Blast_Score=885, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 49473; Mature: 49342
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIE CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCC RIPVWRVDDAGKAHKFADIRLCWPQGSCLVTGADGDERWFDGLPWYLTDLRPQGFLGRAW CCCEEEECCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHCCCCEEEECCCCCCCEEHHH GRKLAAQLNLTEDIRLWQEEDVLYALTVFSGEYTGGWLVGEGNYQRWITAQRPAAIPLDQ HHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHH KLTHYEQLASDALAGEIVGSSAGGEQPKFTCYAQTPSGNKHVLVKFTVPQQTAVSQRWGD HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHH LLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEF HHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHH ISSPGSWPEAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALT HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEC PVYDMLPMAYAPNSAGMLRDAAIEVRFDLNVSKSAWLTAIPLAQQFWQTVAGDPRISEAF CHHHHHCHHCCCCCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHH RHIAQEMPEKIRQIEGKVARMGG HHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure SELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIE CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCC RIPVWRVDDAGKAHKFADIRLCWPQGSCLVTGADGDERWFDGLPWYLTDLRPQGFLGRAW CCCEEEECCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHCCCCEEEECCCCCCCEEHHH GRKLAAQLNLTEDIRLWQEEDVLYALTVFSGEYTGGWLVGEGNYQRWITAQRPAAIPLDQ HHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHH KLTHYEQLASDALAGEIVGSSAGGEQPKFTCYAQTPSGNKHVLVKFTVPQQTAVSQRWGD HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHH LLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEF HHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHH ISSPGSWPEAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALT HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEC PVYDMLPMAYAPNSAGMLRDAAIEVRFDLNVSKSAWLTAIPLAQQFWQTVAGDPRISEAF CHHHHHCHHCCCCCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHH RHIAQEMPEKIRQIEGKVARMGG HHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 3299264 [H]