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The map label for this gene is fimF [H]

Identifier: 91213963

GI number: 91213963

Start: 4912489

End: 4913019

Strand: Direct

Name: fimF [H]

Synonym: UTI89_C5015

Alternate gene names: 91213963

Gene position: 4912489-4913019 (Clockwise)

Preceding gene: 91213962

Following gene: 91213964

Centisome position: 96.97

GC content: 49.15

Gene sequence:

>531_bases
ATGAGAAACAAACCTTTTTATCTTCTTTGCGCTTTTTTGTGGCTGGCGGTAAGTCACGCTTTGGCTGCGGATAGCACGAT
TACTATCCGCGGCTATGTCAGAGATAATGGCTGTAGTGTGGCCGCTGAATCAACCAATTTTACTGTTGATCTGATGGAAA
ACGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCACCCTGTGGTAAC
GCCGTTTCTGCCGTAAAGGTTGGGTTTACCGGCGTTGCAGATAGCCACAATGCCAACCTGCTTGCACTTGAAAATACGGT
GTCAGCGGCTGCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATGAGATACCCCTTAATGCCCCATCGTCCGCGA
TTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGTTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTC
ACTGCGGGGCATATTAATGCCACGGCTACCTTCACTCTTGAATATCAGTAA

Upstream 100 bases:

>100_bases
AGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTG
AATGTCGTTAAGGGGGCGTG

Downstream 100 bases:

>100_bases
CTGGAGATGCTCATGAAATGGTGCAAACGTGGGTATTTATTGGCGGCAATGTTGGCGTTCGCAAGTGCGACGATACAGGC
AGCCGATGTCACCATCACGG

Product: type 1 fimbriae minor subunit FimF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGN
AVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNEIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
TAGHINATATFTLEYQ

Sequences:

>Translated_176_residues
MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGN
AVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNEIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
TAGHINATATFTLEYQ
>Mature_176_residues
MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGN
AVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNEIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
TAGHINATATFTLEYQ

Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=176, Percent_Identity=98.2954545454545, Blast_Score=356, Evalue=1e-100,
Organism=Escherichia coli, GI1787781, Length=171, Percent_Identity=44.4444444444444, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI87081805, Length=156, Percent_Identity=37.1794871794872, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI87082421, Length=185, Percent_Identity=30.8108108108108, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87081753, Length=163, Percent_Identity=33.1288343558282, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1787174, Length=186, Percent_Identity=29.0322580645161, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786746, Length=179, Percent_Identity=32.9608938547486, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790769, Length=154, Percent_Identity=34.4155844155844, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18700; Mature: 18700

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFN
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHH
NIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNE
CCCCCCCCHHHHHEECCCCCCCEEEEECEEECCCCCCCCEEEECCCHHHHHCCCEEEECC
QQNEIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFN
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHH
NIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNE
CCCCCCCCHHHHHEECCCCCCCEEEEECEEECCCCCCCCEEEECCCHHHHHCCCEEEECC
QQNEIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890081; 7610040; 9278503; 1970114 [H]