Click here to switch to the map view.

The map label for this gene is yjbH [H]

Identifier: 91213550

GI number: 91213550

Start: 4490180

End: 4492276

Strand: Direct

Name: yjbH [H]

Synonym: UTI89_C4597

Alternate gene names: 91213550

Gene position: 4490180-4492276 (Clockwise)

Preceding gene: 91213549

Following gene: 91213551

Centisome position: 88.64

GC content: 54.6

Gene sequence:

>2097_bases
ATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAATATATCCTGCGCCCAT
TGGTCCGTCGCAATCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGCATGGCGCGGGAAGGGGAGCTGA
GCCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTG
CGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCATTCTCTGGCGATCAAACGTATAAAGATAAAGCCTT
CGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATTGGCGGTACGG
GGCTGTTTGATGCGGAATATCTTGTTGCCAGCAAAGCCTGGGGGCCGTTCGATTTTACGCTCGGTCTGGGCTGGGGATAT
CTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACA
GGCGGGATCTATCGACGGTAGCCAGATGTTCCACGGCCCGGCCTCACTGTTTGGCGGCGTGGAATACCAGACGCCCTGGC
AACCGCTGCGCCTGAAACTGGAGTATGAAGGCAATAATTATCAGCAGGATTTTGCCGGGAAGCTGGAGCAAAAAAGTAAG
TTTAACGTCGGGGCGATTTATCGCGTTACCGATTGGGCCGACGTTAACCTTAGCTATGAACGTGGCAACACCTTTATGTT
TGGCGTTACGCTGCGCACCAACTTTAACGATCTGCGCCCGTCCTACAACGATAACGCCCGCCCGCAATATCAACCGCAGC
CGCAGGATGCCATTTTGCAGCACTCGGTGGTGGCGAATCAGTTAACGCTGTTGAAATACAACGCCGGACTGGCCGATCCG
CAGATCCAGGCGAAAGGCGATACGCTGTATGTTACCGGCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCG
TGCTAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGC
AGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGGCGGAGAGCCGTTGGGCCACGAAACGACGCTGGCG
CAAAAACGCGTCGAGCCAGTGGTTCCGAAGTCCACCGAGCAGGGCTGGTATATCGACAAATCACGCTTTGATTTCCATAT
CGATCCGGTGCTGAACCAGTCGGTCGGTGGCCCGGAAAACTTTTACATGTATCAGCTGGGCGTGATGGGAACGGCGGATT
TGTGGCTGACGGACCATCTGCTGACCACCGGCAGCCTGTTTGCTAACCTTGCCAACAACTACGACAAGTTTAACTACACC
AATCCGCCGCAGGACTCGCACTTACCGCGCGTTCGTACCCATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAA
CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGAGGTTATCTCGAAACCATGTTTG
GCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAACTACGTTAAACAG
CGCGACTGGCGTAGCGCAAAAGATATGATGAAATTCACCGATTACAGCGTGAAAACCGGACATCTGACCGCGTACTGGAC
GCCATCTTTCGCCCAGGACGTGTTAGTGAAAGCGAGCGTCGGGCAGTATCTGGCTGGGGATAAAGGCGGCACGCTGGAGA
TCGCCAAACGCTTTGATAGCGGCGTGGTAGTGGGGGGCTATGCCACGATCACGAATGTTTCGAAAGAGGAGTACGGCGAA
GGGGACTTCACCAAAGGCGTGTATGTCTCTGTACCGCTGGATCTCTTCTCGTCTGGCCCGACACGCAGCCGTGCGGCGAT
TGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGATATGACCAGCGACCGTA
GCGTCAATTTCCGCTAA

Upstream 100 bases:

>100_bases
GCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACACCTGATGCCCTTAACGCCGACATTCTTCAGACTCTG
ACGCAGCGGATACCCCAATA

Downstream 100 bases:

>100_bases
GTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTC
ACCCCCGGTTTGCGATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLA
QKRVEPVVPKSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Sequences:

>Translated_698_residues
MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLA
QKRVEPVVPKSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
>Mature_698_residues
MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLA
QKRVEPVVPKSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=698, Percent_Identity=99.5702005730659, Blast_Score=1439, Evalue=0.0,
Organism=Escherichia coli, GI1787219, Length=696, Percent_Identity=64.2241379310345, Blast_Score=947, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78490; Mature: 78490

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEECCCCCCCEEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLAQKRVEPVVPKSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEECCCEEECCCHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEECCCCCCCEEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLAQKRVEPVVPKSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEECCCEEECCCHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]