| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is insB2 [H]
Identifier: 91213331
GI number: 91213331
Start: 4255789
End: 4256292
Strand: Direct
Name: insB2 [H]
Synonym: UTI89_C4369
Alternate gene names: 91213331
Gene position: 4255789-4256292 (Clockwise)
Preceding gene: 91213330
Following gene: 91213333
Centisome position: 84.01
GC content: 54.17
Gene sequence:
>504_bases ATGCCGGGCAACTGCCTGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTTTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT CTGAACATAAAACACTATCAATAA
Upstream 100 bases:
>100_bases GCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGAT ATGGCCATGAATGGCGTTGG
Downstream 100 bases:
>100_bases GTTGGAGTCATTACCCCGAATGTTGTTCCTTCCAGATTAAGCGAACTTGTTTCGGATCAGCGGTGCGGTATCGCCAGAGC TGCGCGCCATCAAAGCTGTA
Product: IS1 protein InsB
Products: NA
Alternate protein names: IS1a [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPGNCLHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTM ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ
Sequences:
>Translated_167_residues MPGNCLHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTM ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ >Mature_166_residues PGNCLHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMA TLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYL NIKHYQ
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG1662
COG function: function code L; Transposase and inactivated derivatives, IS1 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 27 family [H]
Homologues:
Organism=Escherichia coli, GI1789853, Length=167, Percent_Identity=98.8023952095808, Blast_Score=343, Evalue=5e-96, Organism=Escherichia coli, GI1788203, Length=167, Percent_Identity=98.8023952095808, Blast_Score=343, Evalue=5e-96, Organism=Escherichia coli, GI1786203, Length=167, Percent_Identity=98.8023952095808, Blast_Score=343, Evalue=5e-96, Organism=Escherichia coli, GI1787223, Length=167, Percent_Identity=95.8083832335329, Blast_Score=333, Evalue=5e-93, Organism=Escherichia coli, GI1786470, Length=167, Percent_Identity=95.8083832335329, Blast_Score=331, Evalue=1e-92, Organism=Escherichia coli, GI1786459, Length=167, Percent_Identity=95.8083832335329, Blast_Score=331, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005063 [H]
Pfam domain/function: PF03400 Transposase_27 [H]
EC number: NA
Molecular weight: Translated: 19597; Mature: 19466
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNCLHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLF CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEE YAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKR EHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCHHHHHHHH YTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ HHHHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PGNCLHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLF CCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEE YAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKR EHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCHHHHHHHH YTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ HHHHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 375010; 1849492; 1630901; 9278503 [H]